Python port of the R copykat package
Project description
copykat-python
Python port of the R copykat package for single-cell copy number aberration (CNA) inference from scRNA-seq data.
Install
pip install copykat-python
Or from source for development:
pip install -e ".[dev]"
Tutorials
copycat-vignettes.ipynb— end-to-end CNA inference and heatmap rendering on the example UMI matrix.
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