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A package to get DMSO plates and wells coordinates, get CPD plates and wells coordinates, get images of the cells treated by the CPD and nearby DMSO.

Project description


1. Installation

pip install cpimgs

2. Instruction

Use this package to check drug corresponding plates and wells. \

  1. The output is a python dictionary. \
  2. The dict can be viewed in console by print function.\
  3. The plates and wells info can be viewed in console as well.
  4. Images will be shown automatically by function getPlotsByNameAndChn

3. Note

The package is still actively under dev. The data is far from curated. Chemical names is a huge problem.

4. Disclaimer

The DMSO plots shown are random DMSO plots in the same well from the drug, not necessarily the representative ones.

Project details

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Files for cpimgs-yzhang250, version 0.0.6
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