A tool for analyzing SSRs in genomic data
Project description
Crossroad
A comprehensive tool for analyzing Simple Sequence Repeats (SSRs) in genomic data, developed at CSIR-IGIB.
Features
- SSR analysis in genomic data
- Gene-based SSR analysis
- Mutational hotspot detection
- Reference-based comparison
- REST API support
Installation
Using pip
Contributors
- Pranjal Pruthi (Project Scientist, CSIR IGIB)
- Dr. Preeti Agarwal (PhD & Senior Research Fellow)
- Dr. Jitendra Narayan (Principal Investigator)
Institution
CSIR-Institute of Genomics and Integrative Biology Lab of Bioinformatics and Big Data analysis Mall Road, New Delhi - 110007, India
License
MIT License
Citation
If you use Crossroad in your research, please cite: [Citation information coming soon]
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file crossroad_cli-0.1.1.tar.gz.
File metadata
- Download URL: crossroad_cli-0.1.1.tar.gz
- Upload date:
- Size: 56.1 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.11.9
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
9894556c60386ccb986daabb0b1d179fb8507686f2c8eb443c5b8b0169a73943
|
|
| MD5 |
da8fa34c2f85687a1359d59dd144f8f9
|
|
| BLAKE2b-256 |
becba8f836eaa2170240249cf5ca20588746f449efa98fcfec5768ec765cadc2
|
File details
Details for the file crossroad_cli-0.1.1-py3-none-any.whl.
File metadata
- Download URL: crossroad_cli-0.1.1-py3-none-any.whl
- Upload date:
- Size: 2.9 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.11.9
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
ef10959240423add5f67dc48892b06227fea1a5f4128a8e7ec218695b41ace05
|
|
| MD5 |
9a9945020d742739554582a7e1ede63b
|
|
| BLAKE2b-256 |
ed6a411f2bcc49348e701fc3d3abf6ddae38991a64ed27a1cf092d85b108b608
|