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A tool for analyzing SSRs in genomic data

Project description

Crossroad

A comprehensive tool for analyzing Simple Sequence Repeats (SSRs) in genomic data, developed at CSIR-IGIB.

Features

  • SSR analysis in genomic data
  • Gene-based SSR analysis
  • Mutational hotspot detection
  • Reference-based comparison
  • REST API support

Installation

Using pip

Contributors

  • Pranjal Pruthi (Project Scientist, CSIR IGIB)
  • Dr. Preeti Agarwal (PhD & Senior Research Fellow)
  • Dr. Jitendra Narayan (Principal Investigator)

Institution

CSIR-Institute of Genomics and Integrative Biology Lab of Bioinformatics and Big Data analysis Mall Road, New Delhi - 110007, India

License

MIT License

Citation

If you use Crossroad in your research, please cite: [Citation information coming soon]

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