csverve
Csverve, pronounced like “swerve” with a “v”, is a package for manipulating tabular data.
Free software: MIT license
Documentation: https://csverve.readthedocs.io.
Features
Take in a regular gzipped CSV file and convert it to csverve format
Merge gzipped CSZ files
Concatenate gzipped CSV files (handles large datasets)
Rewrite a gzipped CSV file (delete headers etc.)
Annotate - add a column based on provided dictionary
Write pandas DataFrame to csverve CSV
Read a csverve CSV
Requirements
Every gzipped CSV file must be accompanied by a meta YAML file. The meta yaml file must have the exact name as the gzipped CSV file, with the addition of a .yaml ending.
csv.gz.yaml must contain:
column names
dtypes for each column
separator
header (bool) to specify if file has header or not
Example:
columns:
- dtype: int
name: prediction_id
- dtype: str
name: chromosome_1
- dtype: str
name: strand_1
header: true
sep: "\t"Credits
This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.
History
0.1.0 (2020-12-16)
First release on PyPI.
2 maintainers
Metadata
2 maintainers
Release files for csverve 0.3.8
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| csverve-0.3.8.tar.gz | 24.7 kB | Without provenance | Details for csverve-0.3.8.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| csverve-0.3.8-py2.py3-none-any.whl | Python 3, Python 2 | none | any | Details for csverve-0.3.8-py2.py3-none-any.whl |
Total release size: 41.0 kB
Release files / csverve-0.3.8.tar.gz
| Download URL | csverve-0.3.8.tar.gz |
|---|---|
| Size | 24.7 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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|
Release files / csverve-0.3.8-py2.py3-none-any.whl
| Download URL | csverve-0.3.8-py2.py3-none-any.whl |
|---|---|
| Size | 16.3 kB |
| Tags | Python 2 Python 3 |
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SHA-256 checksum How to use checksums |
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No |
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twine/1.14.0 pkginfo/1.10.0 requests/2.25.1 setuptools/57.4.0 requests-toolbelt/1.0.0 tqdm/4.66.2 CPython/3.8.16
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Security for csverve 0.3.8
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