Python library to work with CSVW described tabular data
Project description
csvw
This package provides
- a Python API to read and write relational, tabular data according to the CSV on the Web specification and
- commandline tools for reading and validating CSVW data.
Links
- GitHub: https://github.com/cldf/csvw
- PyPI: https://pypi.org/project/csvw
- Issue Tracker: https://github.com/cldf/csvw/issues
Installation
This package runs under Python >=3.8, use pip to install:
$ pip install csvw
CLI
csvw2json
Converting CSVW data to JSON
$ csvw2json tests/fixtures/zipped-metadata.json
{
"tables": [
{
"url": "tests/fixtures/zipped.csv",
"row": [
{
"url": "tests/fixtures/zipped.csv#row=2",
"rownum": 1,
"describes": [
{
"ID": "abc",
"Value": "the value"
}
]
},
{
"url": "tests/fixtures/zipped.csv#row=3",
"rownum": 2,
"describes": [
{
"ID": "cde",
"Value": "another one"
}
]
}
]
}
]
}
csvwvalidate
Validating CSVW data
$ csvwvalidate tests/fixtures/zipped-metadata.json
OK
csvwdescribe
Describing tabular-data files with CSVW metadata
$ csvwdescribe --delimiter "|" tests/fixtures/frictionless-data.csv
{
"@context": "http://www.w3.org/ns/csvw",
"dc:conformsTo": "data-package",
"tables": [
{
"dialect": {
"delimiter": "|"
},
"tableSchema": {
"columns": [
{
"datatype": "string",
"name": "FK"
},
{
"datatype": "integer",
"name": "Year"
},
{
"datatype": "string",
"name": "Location name"
},
{
"datatype": "string",
"name": "Value"
},
{
"datatype": "string",
"name": "binary"
},
{
"datatype": "string",
"name": "anyURI"
},
{
"datatype": "string",
"name": "email"
},
{
"datatype": "string",
"name": "boolean"
},
{
"datatype": {
"dc:format": "application/json",
"base": "json"
},
"name": "array"
},
{
"datatype": {
"dc:format": "application/json",
"base": "json"
},
"name": "geojson"
}
]
},
"url": "tests/fixtures/frictionless-data.csv"
}
]
}
Python API
Find the Python API documentation at csvw.readthedocs.io.
A quick example for using csvw
from Python code:
import json
from csvw import CSVW
data = CSVW('https://raw.githubusercontent.com/cldf/csvw/master/tests/fixtures/test.tsv')
print(json.dumps(data.to_json(minimal=True), indent=4))
[
{
"province": "Hello",
"territory": "world",
"precinct": "1"
}
]
Known limitations
- We read all data which is specified as UTF-8 encoded using the
utf-8-sig
codecs. Thus, if such data starts withU+FEFF
this will be interpreted as BOM and skipped. - Low level CSV parsing is delegated to the
csv
module in Python's standard library. Thus, if acommentPrefix
is specified in aDialect
instance, this will lead to skipping rows where the first value starts withcommentPrefix
, even if the value was quoted. - Also, cell content containing
escapechar
may not be round-tripped as expected (when specifyingescapechar
or acsvw.Dialect
withquoteChar
butdoubleQuote==False
), when minimal quoting is specified. This is due to inconsistentcsv
behaviour across Python versions (see https://bugs.python.org/issue44861).
CSVW conformance
While we use the CSVW specification as guideline, this package does not (and probably never will) implement the full extent of this spec.
- When CSV files with a header are read, columns are not matched in order with
column descriptions in the
tableSchema
, but instead are matched based on the CSV column header and the column descriptions'name
andtitles
atributes. This allows for more flexibility, because columns in the CSV file may be re-ordered without invalidating the metadata. A stricter matching can be forced by specifying"header": false
and"skipRows": 1
in the table's dialect description.
However, csvw.CSVW
works correctly for
- 269 out of 270 JSON tests,
- 280 out of 282 validation tests,
- 10 out of 18 non-normative tests
from the CSVW Test suites.
Compatibility with Frictionless Data Specs
A CSVW-described dataset is basically equivalent to a Frictionless DataPackage where all
Data Resources are Tabular Data.
Thus, the csvw
package provides some conversion functionality. To
"read CSVW data from a Data Package", there's the csvw.TableGroup.from_frictionless_datapackage
method:
from csvw import TableGroup
tg = TableGroup.from_frictionless_datapackage('PATH/TO/datapackage.json')
To convert the metadata, the TableGroup
can then be serialzed:
tg.to_file('csvw-metadata.json')
Note that the CSVW metadata file must be written to the Data Package's directory to make sure relative paths to data resources work.
This functionality - together with the schema inference capabilities
of frictionless describe
- provides
a convenient way to bootstrap CSVW metadata for a set of "raw" CSV
files, implemented in the csvwdescribe
command described above.
See also
- https://www.w3.org/2013/csvw/wiki/Main_Page
- https://csvw.org
- https://github.com/CLARIAH/COW
- https://github.com/CLARIAH/ruminator
- https://github.com/bloomberg/pycsvw
- https://specs.frictionlessdata.io/table-schema/
- https://github.com/theodi/csvlint.rb
- https://github.com/ruby-rdf/rdf-tabular
- https://github.com/rdf-ext/rdf-parser-csvw
- https://github.com/Robsteranium/csvwr
License
This package is distributed under the Apache 2.0 license.
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