CTDFjorder is a Python package for processing and analyzing CTD (Conductivity, Temperature, Depth) data. Documentation: Read the docs
⭐ Features
- Read RBR (.rsk) and SonTek Castaway (.csv) files and extract CTD data
- Process CTD data, including removing non-positive samples and cleaning data
- Calculate derived quantities such as absolute salinity, density, and potential density
- Determine mixed layer depth (MLD) using different methods
- Generate plots for visualizing CTD profiles and derived quantities
- Command-line interface (CLI) for easy processing and merging of CTD data files
📦 Installation
It's recommended that you create a new environment just for CTDFjorder. This can be done in conda with the following command.
conda create --name ctdfjorder python=3.12
conda activate ctdfjorder
To install ctdfjorder you can use pip:
pip install ctdfjorder
🚀 Usage
CTDFjorder provides a command-line interface (CLI) for processing and analyzing CTD data in addition to serving as a python library. A tutorial has been setup here for running the CLI.
⚠️ Issues
If you encounter an issue while running or using CTDFjorder, please submit a report on the Issues page. This is the fastest way to get your problem resolved.
📝 License
CTDFjorder is released under the MIT License.
📑 Citing CTDFjorder
Citation information for CTDFjorder can be found here zenodo.13293665.
📢 Acknowledgments
CTDFjorder was developed for the Fjord Phyto project. The GSW-python library was used for certain dervied calculations.
Citations
McDougall, T. J., & Barker, P. M. (2011). Getting started with TEOS-10 and the Gibbs Seawater (GSW) Oceanographic Toolbox. SCOR/IAPSO WG127.
Pan, B.J.; Vernet, M.; Reynolds, R.A.; Mitchell, B.G.: The optical and biological properties of glacial meltwater in an Antarctic fjord. PLOS ONE 14(2): e0211107 (2019). https://doi.org/10.1371/journal.pone.0211107
1 maintainer
Metadata
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Release files for ctdfjorder 0.8.91
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Source distribution (sdist)
| File | Size | Uploaded | |
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| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| ctdfjorder-0.8.91-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 109.3 kB
Release files / ctdfjorder-0.8.91.tar.gz
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