Hi-C analysis tools by Python3

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  • License: GPL3.0
  • Author: Ryuichiro Nakato
  • Tags Hi-C analysis , 3D genome , NGS
  • Requires: Python >=3.7
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Project description

CustardPy (PyPI)

  • Python 3.7+

Installation

The core component of CustardPy can be installed using pip3: The following are required before installing CustardPy:

pip3 install custardpy

ChangeLog

  • 0.9.1 (2026-3-30)

    • Changed the matplotlib backend used by plotting commands such as plotHiCfeature so that figures can be rendered more quickly.

  • 0.8.0 (2026.3.17)

    • Bug fix in plotMultiScaleInsulationScore where the matplotlib.pyplot was not imported.

  • 0.7.8 (2026.3.16)

    • Bug fix in plotInsulationScore where the matplotlib.pyplot was not imported.

  • 0.7.6 (2025-06-27)

    • Lint check with Ruff.

  • 0.7.2 (2024-03-05)

    • Fixed the error messages in plotHiCfeature_module.py

  • 0.7.1 (2024-03-03)

    • Added the function plot_SamplePair_triu

  • 0.7.0 (2024-03-03)

    • Added this ChangeLog
    • Create plotHiCfeature_module.py
    • Add __version__ to init.py

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for rnakato from gravatar.com rnakato

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: GPL3.0
  • Author: Ryuichiro Nakato
  • Tags Hi-C analysis , 3D genome , NGS
  • Requires: Python >=3.7
Classifiers

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