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A versatile toolkit to analyze roots within petri dishes.

Project description

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cv2_group: Python toolkit for analyzing plant roots

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License License: MIT

About

cv2_group is a Python package that provides tools for processing images of petri dishes containing plants. (EXPAND ON THIS LATER)

Table of Contents

This table of contents is just an example, we can add or remove later.

Main Features

The cv2_group package allows you to analyze roots within a petri dish, here are some of the most useful features:

  • Cropping images based on the petri dish.
  • EXPAND

Where to get it

The latest release of cv2_group is available on PyPI:

pip install cv2_group

Dependencies

The package requires the following core dependencies:

  • numpy
  • opencv-python
  • scikit-image
  • patchify
  • tensorflow
  • matplotlib
  • pillow

These will be installed automatically when you install the package via pip.

License

MIT

Documentation

The official documentation is hosted on Github Pages

Background

Work on cv2_group started at Breda University of Applied Sciences BUas in 2025 and has been under development since then.


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