Jupyter Notebook Kernel for Common Workflow Language
This is a jupyter notebook kernel which enables running Common Workflow Language. It uses cwltool as the execution engine. The goal of the kernel is to improve the human-in-the-loop interaction. The goal of the kernel is to improve human-in-the-loop by improving the following:
- Documenting the workflow
- Enable the developer to execute a workflow with multiple steps splited in multiple JN cells
- Enable the user to execute multiple workflows stitched together
- Ensembl workflows
- Run the same workflow many times over different datasets or with different settings over the same data sets
- Run different workflows over the same datasets
Currently windows are not supported
Examples
In examples directory there are many examples which illustrate how to use the kernel.
How to contribute
If you are a CWL developer and you would like to contribute feel free to open an issue and ask for new features you would like to see.
1 maintainer
Metadata
1 maintainer
Release files for cwlkernel 0.0.4
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | |
|---|---|---|---|---|
| cwlkernel-0.0.4.tar.gz | 25.4 kB | Without provenance | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| cwlkernel-0.0.4-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 58.9 kB
Release files / cwlkernel-0.0.4.tar.gz
| Download URL | cwlkernel-0.0.4.tar.gz |
|---|---|
| Size | 25.4 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
f9cecb4e473c7b9def5c4e430966316cf051312a5b3dae3a6e72d1acc543d5e4
|
|
BLAKE2b-256 checksum How to use checksums |
7018bc99cf3097a3291384cdca0bdcd1fa333a08a90e32c6fab04cac01bccd6d
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.2.0 requests-toolbelt/0.9.1 tqdm/4.48.0 CPython/3.8.5
|
Release files / cwlkernel-0.0.4-py3-none-any.whl
| Download URL | cwlkernel-0.0.4-py3-none-any.whl |
|---|---|
| Size | 33.5 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
0a3c9755d2885dceabcd6e22a636eb2e583591820bb6ae4899db27c532888545
|
|
BLAKE2b-256 checksum How to use checksums |
df2733629fc83330a9cb37db7e525a820ae72fc2e3b7ea1d9fe291e21bc83057
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.2.0 requests-toolbelt/0.9.1 tqdm/4.48.0 CPython/3.8.5
|
Security for cwlkernel 0.0.4
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
No provenance found
None of the files in this release were uploaded with provenance metadata.
A note on package security
PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.
To learn more about protecting yourself from malicious actors, visit our package security documentation.
