## An Interactive Image Segmentation Filter for Multiplex Microscopy.
CyLinter is quality control software for identifying and removing cell segmentation instances corrupted by optical and/or image-processing artifacts in multiplex microscopy images. The tool is user-guided and comprises a set of modular and extensible QC modules instantiated in a configurable [Python](https://www.python.org) Class object. Module results are cached to allow for dynamic restarts.
CyLinter development is led by [Greg Baker](https://github.com/gjbaker) at the [Laboratory of Systems Pharmacology](https://hits.harvard.edu/the-program/laboratory-of-systems-pharmacology/about/), Harvard Medical School.
Funding: This work is supported by the following:
NCI grant U2C-CA233262: Pre-cancer Atlases of Cutaneous and Hematologic Origin
NIH grant U54CA225088: Systems Pharmacology of Therapeutic and Adverse Responses to Immune Checkpoint and Small Molecule Drugs
Ludwig Center at Harvard Medical School and the Ludwig Cancer Research Foundation
Instructions: https://labsyspharm.github.io/cylinter/
Release files for cylinter 0.0.45
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
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| cylinter-0.0.45.tar.gz | 63.9 kB | Details |
Release files / cylinter-0.0.45.tar.gz
| Download URL | cylinter-0.0.45.tar.gz |
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| Size | 63.9 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
2dcf1064a32880b9696293491a85caf1d761b5491667265033afe0afa499c931
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BLAKE2b-256 checksum How to use checksums |
c0d0e80c883c25650e547ffcace71ca053506a113d37c2f9198046175115c646
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twine/4.0.2 CPython/3.10.9
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