dafne-sam2

One-shot support/query matching and segmentation on SAM2 embeddings, for MRI (PerSAM-style bag-of-vectors matching).

Structure

src/dafne_sam2/
  automatic/         automatic pipeline (api.py, backbone.py, checkpoints.py, ...)
  semi_automatic/     semi-automatic pipeline (api.py, session.py, slice_matching.py)
  matching.py         shared multiclass scoring
  preprocessing.py, utils.py, metrics.py   shared utilities
gui/                  Qt interface
app.py                GUI entry point

Install

pip install -e '.[gui]'

Usage

python app.py

Development

pip install -e ".[dev]"
pytest