DataLad support the UKBiobank
DataLad extension for working with the UKbiobank
This software is a DataLad extension that equips DataLad with a set of commands to obtain (and monitor) imaging data releases of the UKbiobank.
UKbiobank is a national and international health resource with unparalleled research opportunities, open to all bona fide health researchers. UK Biobank aims to improve the prevention, diagnosis and treatment of a wide range of serious and life-threatening illnesses – including cancer, heart diseases, stroke, diabetes, arthritis, osteoporosis, eye disorders, depression and forms of dementia. It is following the health and well-being of 500,000 volunteer participants and provides health information, which does not identify them, to approved researchers in the UK and overseas, from academia and industry.
Command(s) provided by this extension
ukb-init-- Initialize an existing dataset to track a UKBiobank participant
ukb-update-- Update an existing dataset of a UKbiobank participant
Before you install this package, please make sure that you install a recent
version of git-annex. Afterwards,
install the latest version of
PyPi. It is recommended to use
a dedicated virtualenv:
# create and enter a new virtual environment (optional) virtualenv --system-site-packages --python=python3 ~/env/datalad . ~/env/datalad/bin/activate # install from PyPi pip install datalad_ukbiobank
All bugs, concerns and enhancement requests for this software can be submitted here: https://github.com/datalad/ukbiobank/issues
If you have a problem or would like to ask a question about how to use DataLad,
please submit a question to
NeuroStars.org with a
NeuroStars.org is a platform similar to StackOverflow but dedicated to
All previous DataLad questions are available here: http://neurostars.org/tags/datalad/
This development was supported by European Union’s Horizon 2020 research and innovation programme under grant agreement VirtualBrainCloud (H2020-EU.22.214.171.124, grant no. 826421).
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