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convenient data storage and retrieval in HDF5 for Treants

Project description

Documentation Status build cov

This datreant submodule adds a convenience interface for numpy and pandas data storage and retrieval using HDF5 within a Treant’s directory structure. It provides the data limb for Treants, Trees, Bundles, and Views from datreant.core.

See the documentation for information on how to use this submodule.

For more information on what datreant is and what it does, check out the official documentation.


See the installation instructions for installation details.

If you want to work on the code, either for yourself or to contribute back to the project, clone the repository to your local machine with:

git clone


This project is still under heavy development, and there are certainly rough edges and bugs. Issues and pull requests welcome!

Check out our contributor’s guide to learn how to get started with contributing back.

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