dbnomics_fetcher_ops 0.4.5

Manage DBnomics fetchers

DBnomics fetcher ops

Manage DBnomics fetchers.

Usage

Install

pip install dbnomics-fetcher-ops

Configure a fetcher

Configure:

• GitLab private token: use --gitlab-private-token option or GITLAB_PRIVATE_TOKEN environment variable. The private token can be a personal access token. It must have the api scope.

Run:

dbnomics-fetchers -v configure scsmich --dry-run
# If everything seems OK, remove the --dry-run flag:
dbnomics-fetchers -v configure scsmich

List fetchers

dbnomics-fetchers -v list
dbnomics-fetchers -v list --slug --no-legacy-pipeline

Development

This repository uses Poetry.

# git clone repo or fork
cd dbnomics-fetcher-ops
poetry install
cp .env.example .env

Run commands with:

poetry run dbnomics-fetchers COMMAND

To use ipdb:

poetry shell
# Find venv dir with "which python"
ipdb3 /path/to/venv/bin/dbnomics-fetchers ...