Skip to main content

dhidb

PyPI version CI and release

dhidb provides read-only Python access to the global 300 m Dynamic Habitat Indices database stored as a dense TileDB array on public S3-compatible object storage. It supports point, bounding-box, and polygon queries without first downloading the complete database.

Installation

pip install dhidb

For development:

python -m pip install -e ".[test]"

Requirements and optional dependencies

DHIDB requires Python 3.10 or newer. The runtime dependencies and the compatibility ranges published by the package are:

Dependency Supported version range
affine >=2.4
numpy >=1.26,<3
pandas >=2.1
pyproj >=3.6
rasterio >=1.3
shapely >=2.0
tiledb >=0.35,<0.38
xarray >=2024.1

Optional features are installed with package extras. There is no generic dhidb[dependency] extra; use the feature-specific extra you need:

Extra Install command Adds
netcdf pip install "dhidb[netcdf]" scipy>=1.11 for NetCDF export
zarr pip install "dhidb[zarr]" zarr>=2.18 for Zarr export
test pip install "dhidb[test]" build, pytest, coverage, Ruff, and SciPy tooling

For local development and testing:

python -m pip install -e ".[test,netcdf,zarr]"

The documentation website has its own Node.js dependencies in website/package.json; they are not part of the Python package extras.

Quick start

from dhidb import DHIProvider

with DHIProvider() as db:
    print(db.years)
    print(db.variables)

    germany = db.query_bbox(
        bounds=(5.8, 47.2, 15.1, 55.1),
        years=[2020, 2021, 2022],
        variables=["dhi_cum", "dhi_min", "dhi_var", "valid_count"],
    )

Documentation

The Docusaurus website source is in website/. Build it locally with:

npm --prefix website install
npm --prefix website run start

Data variables

Variable Meaning Unit
dhi_cum Cumulative productivity from LSP TPROD PPI integral (m2 m-2 day)
dhi_min Minimum seasonal productivity baseline from LSP MINV PPI (m2 m-2)
dhi_var Inter-period GPP coefficient of variation dimensionless
dhi_combined Normalized combined DHI, where available dimensionless
observed_count Number of available 10-day observations scenes
valid_count Number of accepted 10-day observations scenes
qflag_any_count Observations carrying any source quality flag scenes
qflag_rejected_count Observations rejected by quality filtering scenes

License

MIT

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

dhidb-0.2.4.tar.gz (35.0 MB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

dhidb-0.2.4-py3-none-any.whl (12.4 kB view details)

Uploaded Python 3

File details

Details for the file dhidb-0.2.4.tar.gz.

File metadata

  • Download URL: dhidb-0.2.4.tar.gz
  • Upload date:
  • Size: 35.0 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/7.0.0 CPython/3.13.14

File hashes

Hashes for dhidb-0.2.4.tar.gz
Algorithm Hash digest
SHA256 eb8f9868521cc016a79eb27fb0e75108038569a3fa5f5a576457d2d195d0b7c8
MD5 37a281409e374eda2a4be521fb369db0
BLAKE2b-256 75b1581f7ae8ac0ac2f9af4ba3bc4c752f668d4af2d6e70903b1a2949e347d16

See more details on using hashes here.

File details

Details for the file dhidb-0.2.4-py3-none-any.whl.

File metadata

  • Download URL: dhidb-0.2.4-py3-none-any.whl
  • Upload date:
  • Size: 12.4 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/7.0.0 CPython/3.13.14

File hashes

Hashes for dhidb-0.2.4-py3-none-any.whl
Algorithm Hash digest
SHA256 8c52280486a8ce6c09438d70573eb79620c78417e19da4e604269276f21f855d
MD5 0ab370ca63a844c75886a66352f0eb5c
BLAKE2b-256 32764a76fbd334c638eba4d1f35c70973831836fdec0c39e7a39c1431d6598e2

See more details on using hashes here.

Release history Release notifications | RSS feed

0.3.2

2 files

0.3.1

2 files

0.3.0

2 files

0.2.5

2 files

This release

0.2.4 This release

2 files

0.2.3

2 files

0.2.2

2 files

0.2.1

2 files

0.2.0

2 files

0.1.2

2 files

0.1.1

2 files

0.1.0

2 files

Anthropic, PBC Visionary sponsor Bloomberg Visionary sponsor Hudson River Trading Visionary sponsor Meta Visionary sponsor NVIDIA Visionary sponsor Microsoft Sustainability sponsor Depot Continuous Integration AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page