dicom_wsi
Package for converting whole slide image files to DICOM.
Free software: MIT license
Documentation: https://dicom-wsi.readthedocs.io.
Usage
First, you need to install dicom_wsi and its dependencies. See this link for details.
To use dicom-wsi: .. code-block:: console
python dicom_wsi.cli -w <WSI File path> -o <OutputDirectory> -p <output file prefix> -y yaml/base.yaml
or
import dicom_wsi
dicom_wsi.dicom_wsi.create_dicom(cfg, pools=n_pools)That’s it! Most of the time you wan’t need to change anything. But if you do, please see the example yaml file.
Features
TODO
Find out how to determine what FileMetaInformationGroupLength should be
Credits
This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.
History
1.0.5 (2025-10-09)
Fixed AttributeError in cli.py by updating __init__.py.
1.0.4 (2023-10-27)
Decreased dependencies for install
Added tryCatch for Aperio data without expected metadata
0.1.0 (2021-1-22)
First release on PyPI.
1 maintainer
Release files for dicom-wsi 1.0.5
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Source distribution (sdist)
| File | Size | Uploaded | |
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| dicom_wsi-1.0.5.tar.gz | 324.8 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| dicom_wsi-1.0.5-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 373.7 kB
Release files / dicom_wsi-1.0.5.tar.gz
| Download URL | dicom_wsi-1.0.5.tar.gz |
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| Size | 324.8 kB |
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Release files / dicom_wsi-1.0.5-py3-none-any.whl
| Download URL | dicom_wsi-1.0.5-py3-none-any.whl |
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| Size | 48.9 kB |
| Tags | Python 3 |
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