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Generation of finite element meshes from DICOM images

Project description



Generation of finite element meshes using computed tomography scans. Segmentation is based on the graph cut algorithm.


Install the required packages:

pip install pygco scikit-learn loguru pydicom meshio imma imcut seededitorqt io3d


  • Download the code from the git repository:

    git clone git://


  • Use pip:

    pip install git+git://

Running the program

To run DICOM2FEM use the following command:

  python dicom2fem/



Vladimir Lukeš


MIT license

Project details

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