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A high-performance, O(P) data structure for weighted random sampling of binned probabilities, ideal for large-scale simulations.

Project description

DigitBinIndex

A DigitBinIndex is a tree-based data structure that organizes a large collection of weighted items to enable highly efficient weighted random selection and removal. It is a specialized tool, purpose-built for scenarios with millions of items where probabilities are approximate and high performance is critical.

This library provides state-of-the-art, high-performance solutions for both major types of noncentral hypergeometric distributions:

  • Sequential Sampling (Wallenius'): Modeled by select_and_remove.
  • Simultaneous Sampling (Fisher's): Modeled by select_many_and_remove.

The Core Problem

In many simulations, forecasts, or statistical models, one needs to manage a large, dynamic set of probabilities. A common task is to randomly select items based on their weight, remove them, and repeat. Doing this efficiently with millions of items is a non-trivial performance challenge, especially when modeling complex behaviors like Wallenius' or Fisher's distributions, which are common in agent-based simulations like mortality models.

How It Works

DigitBinIndex is a radix tree where the path is determined by the decimal digits of the probabilities. This structure allows it to group items into "bins" based on a configurable level of precision.

  1. Digit-based Tree Structure: The index builds a tree where each level corresponds to a decimal place. For a probability like 0.543, an item would be placed by traversing the path: root -> child[5] -> child[4] -> child[3].

  2. Roaring Bitmap Bins: The node at the end of a path acts as a "bin." Instead of a simple list, it holds a Roaring Bitmap, a highly optimized data structure for storing and performing set operations on integers. This is the key to the library's high performance for simultaneous (Fisher's) draws.

  3. Accumulated Value Index: Each node in the tree stores the accumulated_value (the sum of all probabilities beneath it). This allows for extremely fast O(P) weighted random selection, where P is the configured precision.

Features

  • State-of-the-Art Performance: Outperforms standard, general-purpose data structures for both sequential and simultaneous weighted sampling.
  • Dual-Model Support: Provides optimized methods for both Wallenius' (select_and_remove) and Fisher's (select_many_and_remove) distributions.
  • Effectively O(1) Complexity: Core operations have a time complexity of O(P), where P is the configured precision. This is effectively constant time, independent of the number of items.
  • Memory Efficient: The combination of a sparse tree and Roaring Bitmaps makes it highly memory-efficient for most datasets.

Performance

DigitBinIndex makes a deliberate engineering trade-off: it sacrifices a small, controllable amount of precision by binning probabilities to gain significant improvements in speed.

The standard alternative is a Fenwick Tree, which is perfectly accurate but has a slower O(log N) complexity. The benchmarks below compare DigitBinIndex against a highly optimized Fenwick Tree implementation.

Wallenius' Draw (Sequential Selections)

This benchmark measures the total time to perform a loop of 1,000 select_and_remove operations. The results show DigitBinIndex's superior O(P) complexity provides a massive and growing advantage as the dataset size increases.

Number of Items (N) DigitBinIndex Loop Time FenwickTree Loop Time Speedup Factor
100,000 ~0.46 ms ~1.77 ms ~3.9x faster
1,000,000 ~0.52 ms ~13.58 ms ~26.1x faster

Fisher's Draw (Simultaneous Selections)

This benchmark measures the time to select a single batch of unique items (1% of the total population). After algorithmic improvements, DigitBinIndex now uses a batched rejection sampling approach that is significantly more efficient than its previous method and faster than the Fenwick Tree's equivalent.

Scenario (N items, draw k) DigitBinIndex Time FenwickTree Time Speedup Factor
N=100k, k=1k ~0.47 ms ~1.87 ms ~4.0x faster
N=1M, k=10k ~5.48 ms ~20.16 ms ~3.7x faster

As the results show, DigitBinIndex outperforms the Fenwick Tree in both sequential and simultaneous batched selection scenarios, making it a highly effective tool for large-scale weighted random sampling simulations.


When to Choose DigitBinIndex

This structure is the preferred choice when your scenario matches these conditions:

  • You need high-performance Wallenius' or Fisher's sampling.
  • Your dataset is large (N > 100,000).
  • Your probabilities are approximate. If your weights come from empirical data, simulations, or ML models, the precision beyond a few decimal places is often meaningless.
  • Performance is more critical than perfect precision.

You should consider a more general-purpose data structure (like a Fenwick Tree) only if you require perfect, lossless precision and your data is "digitally incompressible" (e.g., all items differ only at a very high decimal place).


Choosing a Precision

The precision parameter controls the depth of the radix tree and represents the core trade-off of the library: Accuracy vs. Performance & Memory. Choosing the right value is key to getting the most out of DigitBinIndex.

The Rule of Thumb

For most applications, a precision of 3 or 4 is an excellent starting point. This provides a great balance, capturing the vast majority of the weight distribution while remaining extremely fast.

The Mathematical Intuition

The impact of each decimal place on an item's probability diminishes exponentially. Consider a weight of 0.12345:

  • The 1st digit (1) contributes 0.1 to the value.
  • The 2nd digit (2) contributes 0.02.
  • The 3rd digit (3) contributes 0.003.
  • The 4th digit (4) contributes only 0.0004.

By truncating at 3 digits, the maximum error for any single item is less than 0.001. When sampling from a large population, these small, random errors tend to average out, having a negligible effect on the final distribution of selections. The first few digits capture almost all of the meaningful relative differences between item weights, which is what drives a weighted random draw.

Guidance

Here is a summary to help guide your choice:

Precision Typical Use Case Trade-offs
1-2 Maximum performance, minimal memory usage. Best for coarse-grained weights (e.g., 0.1, 0.5, 0.9). Loses significant accuracy with finely-grained data.
3-4 Recommended Default. The optimal balance for most scenarios. Captures sufficient detail for typical floating-point data from simulations or models, with negligible performance cost.
5+ High-fidelity scenarios where weights are very close. Use if you must distinguish between weights like 0.12345 and 0.12346. This increases memory usage and is slightly slower, but still O(P).

Usage

First, add digit-bin-index to your project's dependencies in Cargo.toml. You will also need rust_decimal because it is used in the public API for defining item weights.

[dependencies]
digit-bin-index = "0.2.2"    # Use the latest version from crates.io
rust_decimal = "1.37"        # The decimal type used in the API
rust_decimal_macros = "1.37" # Recommended for easily creating decimals

Then, you can use DigitBinIndex in your project to perform both sequential (Wallenius') and simultaneous (Fisher's) draws.

use digit_bin_index::DigitBinIndex;
use rust_decimal_macros::dec; // A convenient macro, dec!

fn main() {
    // Create a new index with a precision of 3 decimal places.
    let mut index = DigitBinIndex::with_precision(3);

    // Add individuals with their ID and a specific weight.
    index.add(101, dec!(0.123)); // Low weight
    index.add(202, dec!(0.800)); // High weight
    index.add(303, dec!(0.755)); // High weight
    index.add(404, dec!(0.110)); // Low weight

    // --- Example 1: Sequential (Wallenius') Draw ---
    // Select one item, which is removed from the pool for subsequent draws.
    // The higher weighted items (202, 303) are more likely to be chosen.
    if let Some((selected_id, approx_weight)) = index.select_and_remove() {
        println!("Wallenius draw selected: ID {}, Weight ~{}", selected_id, approx_weight);
    }
    println!("Items remaining: {}", index.count()); // Will be 3

    // --- Example 2: Simultaneous (Fisher's) Draw ---
    // Select a batch of 2 unique items.
    // This is more efficient than calling select_and_remove() in a loop.
    if let Some(selected_ids) = index.select_many_and_remove(2) {
        println!("Fisher's draw selected IDs: {:?}", selected_ids);
    }
    println!("Items remaining: {}", index.count()); // Will be 1
}

License

This project is licensed under the MIT License.

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