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ISA organisation for metabolomic studies with Django

Project description

Build Status (Travis) Py versions

ISA organisation for metabolomic studies with Django

Further documentation available on ReadTheDocs

Quick start

  1. Add “misa” and django application dependencies to your INSTALLED_APPS setting like this (misa should come before gfiles and mbrowse):

  2. Include the polls URLconf in your project like this:

    url(r'^', include('gfiles.urls')),
    url('mbrowse/', include('mbrowse.urls')),
    url('misa/', include('misa.urls')),
  3. Run python migrate to create the misa models.

  4. Start the development server and visit

  5. Register and login

  1. Create an investigation, study, assay
  2. Upload data to an assay[assay-id]/
  3. Add a protocol e.g. Chromatography protocol
  4. Add ontology information

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