dlex 0.0.2

Deep learning library for research experiments

[!] This code is under development and mainly for my personal use. This project is for fast prototyping of deep learning and machine learning model with minimal code. Some parts of the code may not be well-commented or lack of citation.

Features

• Writing minimal code to set up a new experiment
• Pytorch or Tensorflow 2.0 or scikit-learn as backend with similar training flow
• Efficiently log and analyze model results
• Cross-platform GUI for monitoring experiments, either local or remote sever (Electron-based)

See here for a list of implemented models

Installation

pip install dlex

Set up an experiment

Step 1: Folder structure

Experiment/
|-- model_configs
|-- model_outputs
|-- logs
|-- saved_models
|-- src
|   |-- datasets
|   |   |-- <dataset>.py
|   |-- models
|   |   |-- <model>.py
|-- README.md

Model parameters and outputs are saved to ./saved_models and ./model_outputs unless DLEX_SAVED_MODELS_PATH and DLEX_MODEL_OUTPUTS_PATH is specified

Step 2: Define dataset

• Dataset Builder: handle downloading and preprocessing data. DatasetBuilder should be framework and config independent.
• PytorchDataset, TensorflowDataset: handle loading dataset from the storage, shuffle, sort, batchify, etc. using concepts from each framework

from dlex.configs import AttrDict
from dlex.datasets.torch import PytorchDataset
from dlex.datasets.builder import DatasetBuilder

class SampleDatasetBuilder(DatasetBuilder):
    def __init__(self, params: AttrDict):
        super().__init__(params)
        
    def maybe_download_and_extract(self, force=False):
        super().maybe_download_and_extract(force)
        # Download dataset...
        # self.download_and_extract([some url], self.get_raw_data_dir())
            
    def maybe_preprocess(self, force=False):
        super().maybe_preprocess(force)
        # Preprocess data...
        
    def get_pytorch_wrapper(self, mode: str):
        return PytorchSampleDataset(self, mode)

class PytorchSampleDataset(PytorchDataset):
    def __init__(self, builder, mode):
        super().__init__(builder, mode)
        # Load data from preprocessed files...

Step 3: Construct model

Model supports loss calculation, training, predicting and outputting prediction to specified format.

from dlex.torch.models.base import BaseModel

class Model(BaseModel):
     def __init__(self, params, dataset):
        super().__init__(params, dataset)

    def infer(self, batch):
        ...

    def forward(self, batch):
        ...

    def loss(self, batch):
        ...

Step 4: Configuration

Model

Dataset

Train

• batch_size: int or dict of { [progress]: [batch_size] } (0 as key must always be included)

• num_epochs

• optimizer: dict of name and optimizer's arguments. Support sgd, adam, adadelta.

Test

• batch_size: int. Training batch size value is used if not specified.

model:
  name: {model import path}
  ...{model configs}
dataset:
  name: {dataset import path}
  ...{dataset configs}
train:
  batch_size: 256
  num_epochs: 30
  optimizer:
    name: adam
    learning_rate: 0.01
    weight_decay: 1e-5

Step 5: Train & evaluate

dlex train <config_path>
dlex evaluate <config_path>
dlex infer <config_path>

Environment Variables

• DLEX_TMP_PATH (default: ~/tmp)
• DLEX_DATASETS_PATH (default: ~/tmp/dlex/datasets)
• DLEX_SAVED_MODELS_PATH (default: ./saved_models)

Using dlex

https://github.com/trungd/ml-graph: Implementations of machine learning algorithms for graph