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Library+Tool to run restriction digests of DNA sequences

Project description

Galaxy tool with the following aims:

  • digest DNA into fragments, produce FASTA output of that
  • plot restriction digests in easy to use SVG format
  • run “hypothetical gels” to help biologists understand the output of these fancy computer things
  • optimise restrictions with multiple genomes in order to easily determine enzymes for unique resetriction patterns

Running

python bin/digest_dna.py test.fa Bsp6I,Bsp13I,DseDI

History

0.1.0 (2015-03-16)

  • Finished implementation of graphics drawer

Project details


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Files for dnadigest, version 0.1.2
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