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Library+Tool to run restriction digests of DNA sequences

Project description

Galaxy tool with the following aims:

  • digest DNA into fragments, produce FASTA output of that
  • plot restriction digests in easy to use SVG format
  • run “hypothetical gels” to help biologists understand the output of these fancy computer things
  • optimise restrictions with multiple genomes in order to easily determine enzymes for unique resetriction patterns

Running

python bin/digest_dna.py test.fa Bsp6I,Bsp13I,DseDI

History

0.1.0 (2015-03-16)

  • Finished implementation of graphics drawer

Project details


Release history Release notifications

This version
History Node

0.1.2

History Node

0.1.0

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Filename, size & hash SHA256 hash help File type Python version Upload date
dnadigest-0.1.2-py2.7.egg (60.2 kB) Copy SHA256 hash SHA256 Egg 2.7 Mar 19, 2015
dnadigest-0.1.2-py2-none-any.whl (57.1 kB) Copy SHA256 hash SHA256 Wheel py2 Mar 19, 2015
dnadigest-0.1.2.tar.gz (84.4 kB) Copy SHA256 hash SHA256 Source None Mar 19, 2015

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