Library+Tool to run restriction digests of DNA sequences
Project description
Galaxy tool with the following aims:
digest DNA into fragments, produce FASTA output of that
plot restriction digests in easy to use SVG format
run “hypothetical gels” to help biologists understand the output of these fancy computer things
optimise restrictions with multiple genomes in order to easily determine enzymes for unique resetriction patterns
Running
python bin/digest_dna.py test.fa Bsp6I,Bsp13I,DseDI
History
0.1.0 (2015-03-16)
Finished implementation of graphics drawer
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distributions
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file dnadigest-0.1.2.tar.gz.
File metadata
- Download URL: dnadigest-0.1.2.tar.gz
- Upload date:
- Size: 84.4 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
da347f18652b952e5e0fc90a72251ebc1688e791745f418591a2a51d0406a0ac
|
|
| MD5 |
bfb8f305eefaca77a155d5d302d5d7a9
|
|
| BLAKE2b-256 |
8f4860331964dc5cf67d63fc8f872984bf59c7b88116c32e2ea85ef65614c72d
|
File details
Details for the file dnadigest-0.1.2-py2.7.egg.
File metadata
- Download URL: dnadigest-0.1.2-py2.7.egg
- Upload date:
- Size: 60.2 kB
- Tags: Egg
- Uploaded using Trusted Publishing? No
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
7a21924ac087c83a0c54f4ca3df85e75ae2fc0dd044297f4e886014a10ef9d9c
|
|
| MD5 |
560e4b84096a22e8a9913ecbef7be92c
|
|
| BLAKE2b-256 |
7ddf3221086bb6ed4c725e09760ebcf23bd9ca15175535377d2e108b0f57bd23
|
File details
Details for the file dnadigest-0.1.2-py2-none-any.whl.
File metadata
- Download URL: dnadigest-0.1.2-py2-none-any.whl
- Upload date:
- Size: 57.1 kB
- Tags: Python 2
- Uploaded using Trusted Publishing? No
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
46ceba01ebc69674188898ac8c9404fc5ec6633d27e2abf89a07607d0dd7f9d9
|
|
| MD5 |
daebb479cc64f7a475cc58d6e1d011ea
|
|
| BLAKE2b-256 |
54fbee3b4b4e7b94d6a77491903395b951f3a08f8fbfc5972e87025926fab0c8
|
