Skip to main content

Evolutionary Neural Architecture Search -- compress any PyTorch model with one function call

Project description

dNATY

dNATY

Evolutionary AI Model Compression

8–83% fewer FLOPs (median −56% across 17 real datasets) · accuracy kept · no GPU required

PyPI version Python 3.10+ PyTorch 2.0+ License: BSL-1.1

Compress any PyTorch model with one function call. dNATY uses multi-objective evolutionary search (NSGA-II) guided by episodic memory to find smaller, faster architectures — automatically, on a standard CPU.

pip install dnaty

Website · Docs · Benchmarks · Changelog


Quickstart

import torch.nn as nn
import dnaty
from dnaty import compress
from dnaty.experiments.fast_dataset import FastDataset

# 1. Your model — any nn.Module with Linear layers
model = nn.Sequential(
    nn.Flatten(),
    nn.Linear(784, 512), nn.ReLU(),
    nn.Linear(512, 256), nn.ReLU(),
    nn.Linear(256, 10)
)

# 2. Load dataset (cached in RAM — zero I/O across generations)
ds = FastDataset("MNIST", device="cpu", train_subset=10_000)

# 3. Compress
result = compress(model, ds, target_flops=0.5, n_generations=30)

print(result.summary())
# CompressResult | arch=[...] | FLOPs -44% (1,133,056 -> ~633K) | acc=0.977
# (exact numbers vary by seed/subset; run scripts/prove_it.py to reproduce)

The compressed model is a regular nn.Module — drop it into your existing pipeline:

result.model                  # nn.Module, ready for inference
result.accuracy               # 0.977  (example; varies by seed/subset)
result.flops_reduction_pct    # 44.1   (example)
result.arch                   # [301, 226, 32, 128]  ← hidden layer sizes found

# Save / reload
result.save("compressed.pt")
result = dnaty.load("compressed.pt")

# Export to ONNX for edge deployment (no PyTorch needed on the device)
result.export_onnx("model.onnx", input_shape=(784,))

# Measure real CPU latency on your machine
print(result.benchmark_latency((784,)))   # p50/p95/p99 ms + fps

Why dNATY?

The problem: most models ship larger than they need to be. That means slower inference, higher cloud bills, and models too heavy for edge devices (cameras, drones, robots, industrial boxes). Shrinking them by hand is days of trial-and-error with no guarantee you found the best size/accuracy trade-off.

What you get with dNATY:

  • Smaller, cheaper models — 8–83% fewer FLOPs across 18 real datasets, accuracy kept
  • No GPU — the search runs on CPU in minutes, so it works in CI and on the hardware you already have
  • No manual architecture design — point it at a model + dataset, get a deployable nn.Module back
  • One function callcompress(model, dataset); export to .pt / .onnx

"Why not just TensorRT or TFLite?" — wrong layer.

Runtimes optimize execution of a fixed architecture. dNATY optimizes the architecture itself, upstream of any runtime. You don't choose between them — you chain them: compress()export_onnx() → load into TensorRT / TFLite / ONNX Runtime. The savings stack.

Versus other compression techniques

Method What it does Catch
Quantization Lower-precision weights (fp32→int8) Same architecture & op count. Stack it on top of dNATY.
Pruning Zeroes individual weights Needs sparse runtimes to actually run faster; manual tuning
Distillation Trains a small student model You design the student + write the training loop
DARTS Gradient-based architecture search Needs a GPU + hours of config
Random NAS Random architecture sampling No memory — re-tries bad ideas
dNATY Evolves a smaller architecture, memory-guided CPU-only, one call

The engine is episodic memory-guided evolutionary search: operators that helped in past generations get sampled more often, so it consistently finds better compression than random NAS at the same generation budget — no gradients, no GPU.


Measured results

All numbers measured on a standard desktop CPU, validation accuracy on a held-out 20% split, reproducible from scripts in this repo. Full tables, configs, and caveats: dnaty.org/benchmarks.

13 public datasets (n_generations=30, n_pop=15) — top rows:

Dataset Samples FLOPs ↓ Val acc Domain
Electrical Fault Detect 12,001 −83.0% 99.25% smart grid sensors
Dry Bean Quality 13,611 −83.4% 92.43% agricultural IoT
Predictive Maint. (AI4I) 10,000 −83.1% 96.70% factory IoT
Breast Cancer (UCI) 569 −72.6% 99.56% clinical tabular
Credit Card Fraud (full) 284,807 −64.0% 99.96% financial anomaly
Network Intrusion (NSL-KDD) 31,490 −56.3% 99.46% edge security
HAR Sensors (UCI) 10,299 −46.8% 99.17% wearables · robotics
MNIST (full 70K) 70,000 −41.8% 98.68% vision · digits

5 public Kaggle datasets — different sizes, domains, and feature counts. Reproduce: python scripts/benchmark_market_real.py (downloads from Kaggle, ~2 h on CPU).

Dataset Rows Features FLOPs ↓ Val acc Domain
IBM HR Employee Attrition 1,470 51 −75.5% 99.3% HR / corporate
Adult Census Income 32,561 104 −74.4% 90.4% social / financial
Air Quality (UCI) 7,674 12 −45.0% 91.2% environmental sensors
Diabetes 130-US Hospitals 101,766 119 −8.0% 89.3% clinical / hospital
Telco Customer Churn 7,043 45 +20% ⚠ 93.2% telecom

4 of 5 compressed (median −45%). The Telco case: NSGA-II explored deeper rather than narrower from the [512, 256, 128] baseline — model_grew=True was raised automatically. Passing a wider baseline ([1024, 512, 256]) or increasing target_flops resolves it. This is expected Pareto behavior, not a silent failure.

Compression scales with how oversized the baseline is — dNATY finds the right size, it doesn't force a fixed cut. Lean models get small cuts (correct Pareto behavior); the library warns explicitly when nothing was cut.

Continual learning — 3 benchmarks, 3 seeds each

Split-MNIST (5 tasks, digit pairs) — proof of concept:

Method BWT (↑ better)
dNATY (balanced replay) −0.204 ~5× less forgetting vs EWC
EWC (λ=400) −0.998 near-total forgetting
MLP (no CL) −0.998 baseline

Permuted-MNIST (10 tasks, domain-incremental) and Split-CIFAR-10 (5 tasks, class-incremental) are harder benchmarks with results in results/exp4_* and results/exp5_*. Note: Split-MNIST is a weak benchmark — it is included for comparability with prior work. The harder benchmarks are the primary CL evidence. Full methodology and comparisons to ER-ACE/MAML: METHODOLOGY.md.

CPU latency comparison

Reproduce: python scripts/prove_it.py (NAS vs random) · python -m dnaty.experiments.exp3_cl (Split-MNIST) · python -m dnaty.experiments.exp4_permuted_mnist (Permuted-MNIST) · python -m dnaty.experiments.exp5_split_cifar10 (Split-CIFAR-10)


API at a glance

You want to… Use
Compress a tabular/sensor MLP compress(model, data, target_flops=0.5)
Compress a small CNN trained from scratch compress_cnn(model, loader) (early access — CIFAR-scale classification)
Compress the head of a pretrained backbone compress_with_backbone(resnet, loader, finetune_backbone=True)
Thin out conv layers too prune_conv_channels(model, amount=0.3)
Deploy without PyTorch on the device result.export_onnx("m.onnx", input_shape=...)
Save / reload result.save("m.pt") / dnaty.load("m.pt")
Detect data drift in production DriftDetector().fit(X_train) + ProductionTracker(model, detector)
Profile compute before deciding count_flops(model, input_shape) / flops_by_layer(...)
Get the full accuracy/FLOPs trade-off curve result.pareto_front / result.pareto_front_csv("front.csv")
Reuse search knowledge on a related task result.save_memory("prior.json")compress(..., warm_start="prior.json")

Supported backbones for compress_with_backbone: ResNet, MobileNetV2/V3, EfficientNet, VGG, DenseNet, ViT, and custom models with an fc/classifier/head attribute.

Full reference with copy-paste recipes: dnaty.org/docs

Example — pretrained backbone for edge deployment

import torchvision.models as tv
import dnaty

backbone = tv.mobilenet_v2(weights="IMAGENET1K_V1")
dnaty.prune_conv_channels(backbone, amount=0.2)          # optional: thin convs first

result = dnaty.compress_with_backbone(
    backbone, train_loader,
    target_flops=0.4,
    finetune_backbone=True, finetune_epochs=10,
)
result.export_onnx("mobilenet_edge.onnx", input_shape=(3, 224, 224))

Deterministic results

result = compress(model, ds, target_flops=0.5, n_generations=30, seed=42)
# Same seed → identical result. The pytest suite gates every release on this.

New in 2.1.0

The full Pareto front, not just one model

compress() returns a single winner, but the search explores a whole accuracy/FLOPs trade-off curve. That curve is now exposed — pick the point that fits your device budget instead of accepting one pre-chosen size:

result = compress(model, ds, target_flops=0.5, n_generations=30)

print(result.pareto_summary())
# Pareto front — 6 non-dominated architecture(s):
#   arch=[196, 29, 128]  acc=0.9731  FLOPs=27,400 (-64.2%)  params=14,762
#   arch=[224, 32, 16, 128]  acc=0.9788  FLOPs=29,184 (-61.9%)  params=15,795
#   ...

result.pareto_front           # list of {arch, accuracy, flops, params, flops_reduction_pct}
result.pareto_front_csv("front.csv")   # plot the trade-off curve in your paper

Front accuracies are eval-mode, NAS-phase (un-fine-tuned) numbers for choosing an operating point; the returned result.model is the fine-tuned winner.

Transferable memory — the search learns your domain

dNATY's engine is episodic memory: it learns which structural mutations help. In 2.1.0 that learned operator prior is transferable. Save it after one run and warm-start the next related task — the search starts biased toward what already worked instead of re-discovering it, so it converges in fewer generations:

# Task A — learn a prior on your first sensor model
r1 = compress(model_a, data_a, target_flops=0.5)
r1.save_memory("sensor_prior.json")

# Task B — a related model/dataset in the same domain, warm-started
r2 = compress(model_b, data_b, target_flops=0.5, warm_start="sensor_prior.json")

# or chain in-process, no disk:
r2 = compress(model_b, data_b, warm_start=r1.export_memory())

warm_start_weight (default 2.0) controls how decisively the prior biases early generations — 0 ignores it, ≥4 is aggressive. The prior fades as task-specific evidence accumulates, so it is a head start, not a cage.

Measure the speedup yourself: python scripts/warm_start_demo.py runs cold vs warm-started on two related tasks and reports generations-to-target. This is operator-prior transfer between related MLP/tabular tasks — not a claim about ImageNet-scale conv search.


Scope, stated plainly

Strong: MLPs on tabular/sensor data; classifier heads on frozen CNN/ViT backbones; CPU-only environments. Not yet: full convolutional NAS end-to-end (under development — convs are handled by structural pruning today); transformer/LLM compression; models that are already minimal (no fat → little or no cut, and the library warns you when the model would need to grow).

No comparison against OFA or MnasNet is claimed — those target full conv search spaces on GPUs; dNATY targets CPU-only workflows on a different problem slice.


Installation

pip install dnaty                # stable (recommended)
pip install dnaty==2.1.0         # pin to this release
pip install git+https://github.com/pedrovergueiro/dNaty  # latest from source

Requirements: Python 3.10+, PyTorch 2.0+, NumPy 1.24+

pip install dnaty[dev]   # adds pytest, matplotlib, jupyter

Project structure

dNaty/
├── dnaty/
│   ├── compress.py              # public API: compress, compress_cnn,
│   │                            #   compress_with_backbone, prune_conv_channels
│   ├── result.py                # CompressResult (+ Pareto front, save_memory) / load()
│   ├── evolution/evolver.py     # DnatyEvolver / CnnEvolver — NSGA-II search (+ warm_start)
│   ├── core/                    # DynamicMLP, DynamicCNN, Individual, episodic memory + priors
│   ├── operators/               # structural mutation operators (dense + conv)
│   ├── training/local_train.py  # fast local trainer
│   ├── monitoring/              # DriftDetector, ProductionTracker
│   ├── utils/flops_counter.py   # count_flops, flops_by_layer
│   └── experiments/fast_dataset.py  # zero-I/O MNIST/FashionMNIST/CIFAR10 loader
├── scripts/                     # prove_it.py, warm_start_demo.py, benchmark_market_real.py, ...
└── tests/                       # pytest suite (142 tests) — gates every release

Hosted version

Prefer not to run it locally? dnaty.org hosts the same engine with a web UI and REST API — upload a CSV, get a compressed model back. Free tier: 1 training a day, no card.


Citation

@software{vergueiro_dnaty_2026,
  author  = {Vergueiro, Pedro},
  title   = {dNaty: Dynamic Neuro-Adaptive sYstem with evoluTionarY Learning},
  year    = {2026},
  url     = {https://github.com/pedrovergueiro/dNaty},
  version = {2.1.0},
  license = {BSL-1.1}
}

License

Business Source License 1.1 — free for research, academic work, and personal projects. Commercial use requires a license: dnaty.org/commercial · pedrol.vergueiro@gmail.com

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

dnaty-2.1.0.tar.gz (124.1 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

dnaty-2.1.0-py3-none-any.whl (94.1 kB view details)

Uploaded Python 3

File details

Details for the file dnaty-2.1.0.tar.gz.

File metadata

  • Download URL: dnaty-2.1.0.tar.gz
  • Upload date:
  • Size: 124.1 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.2.0 CPython/3.14.2

File hashes

Hashes for dnaty-2.1.0.tar.gz
Algorithm Hash digest
SHA256 fe302b0245250a2b9c53bad7e9ce4b247d8f74f7629485c4c7095fa32de0809c
MD5 48004f6748188f38470fd91534a64df2
BLAKE2b-256 84280e6455b224880eab337f168e8b013f58c5857bb32823fcf95bc9e77a05f5

See more details on using hashes here.

File details

Details for the file dnaty-2.1.0-py3-none-any.whl.

File metadata

  • Download URL: dnaty-2.1.0-py3-none-any.whl
  • Upload date:
  • Size: 94.1 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.2.0 CPython/3.14.2

File hashes

Hashes for dnaty-2.1.0-py3-none-any.whl
Algorithm Hash digest
SHA256 900ac14be8c5dccaa9e8fcd15505be00d738670815639e2a8c617f2755428be7
MD5 91b2a0284032a1ada3a2fc0b7e153ef5
BLAKE2b-256 af7dbc0ffbfc39bd7ab79bcee75b94fa73e6e44031f691a545cb66379acdd74b

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page