DrawGly

DrawGly is a Python library for drawing Symbol Nomenclature for Glycans (SNFG), using GlyConnect API.

Requirements

python >= 3.9

Installation

python -m pip install drawgly

Usage

Using get_cartoon() to get the cartoon and saving the image. More information can be found in the docstring.

Note: This function uses GlyConnect API to get the cartoons, please make sure you have an internet connection.

from drawgly import get_cartoon

struct_format = "gws"
structure = "freeEnd--?a1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc," \
            "p--??1D-Gal,p--??2D-NeuAc,p}--??1Ac$MONO,Und,0,0,freeEnd"
output_path = "output.png"

get_cartoon(struct_format, structure, output_path)

Example output:

License

This project is licensed under the MIT License. See the LICENSE file for more information.