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Disentangled Generative Representation of Single Cell Omics

Project description

DRVI

Build Tests Documentation Python Version

Unsupervised Deep Disentangled Representation of Single-Cell Omics

DRVI concept

Getting started

Please refer to the documentation. In particular, the

Installation

You need to have Python 3.10, 3.11, or 3.12 installed on your system. If you don't have Python installed, we recommend installing Mambaforge.

There are several options to install drvi:

  1. Install the latest release of drvi-py from PyPI:
pip install drvi-py
  1. Install the latest development version:
pip install git+https://github.com/theislab/drvi.git@main

Release notes

See the changelog.

Contact

If you found a bug, please use the issue tracker.

Citation

If DRVI is helpful in your research, please consider citing the following paper:

Moinfar, A. A. & Theis, F. J. Unsupervised deep disentangled representation of single-cell omics. bioRxiv 2024.11.06.622266 (2024) doi:10.1101/2024.11.06.622266.

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