dsi-bitstream 0.3.0

No project description provided

dsi-bitstream-py

Python bindings for dsi-bitstream-rs, a Rust implementation of read/write bit streams supporting several types of instantaneous codes.

Installation

pip install dsi_bitstream

Usage

Reading and writing codes

from dsi_bitstream import BitWriterLittleEndian, BitReaderLittleEndian

writer = BitWriterLittleEndian("./bitstream.bin")

# All write methods return the number of bits written.
writer.write_bits(10, n=5)         # write 10 as 5 raw bits
writer.write_unary(100)
writer.write_gamma(10)
writer.write_delta(2)
writer.write_omega(7)
writer.write_rice(3, k=4)
writer.write_golomb(4, b=10)
writer.write_zeta(10, k=3)
writer.write_pi(42, k=2)
writer.write_exp_golomb(100, k=3)
writer.write_minimal_binary(10, max=100)
writer.flush()

reader = BitReaderLittleEndian("./bitstream.bin")
assert reader.read_bits(n=5) == 10
assert reader.read_unary() == 100
assert reader.read_gamma() == 10
assert reader.read_delta() == 2
assert reader.read_omega() == 7
assert reader.read_rice(k=4) == 3
assert reader.read_golomb(b=10) == 4
assert reader.read_zeta(k=3) == 10
assert reader.read_pi(k=2) == 42
assert reader.read_exp_golomb(k=3) == 100
assert reader.read_minimal_binary(max=100) == 10

Seeking is supported on the reader:

pos = reader.bit_pos()   # bits from the start of the file
reader.set_bit_pos(pos)  # seek back

Big-endian variants are available as BitReaderBigEndian / BitWriterBigEndian.

Analyzing codes with CodesStats

CodesStats records a stream of non-negative integers and computes the total bit cost for every supported code, so you can pick the most compact one:

from dsi_bitstream import CodesStats

stats = CodesStats()
for value in data:
    stats.update(value)

# Best code and its total bit cost.
code, bits = stats.best_code()   # e.g. ("Zeta(3)", 48120)

# Full ranking, cheapest first.
for code, bits in stats.get_codes():
    print(f"{code:>20s}: {bits} bits")

# Query a specific code.
bits = stats.bits_for("Delta")   # returns None if out of tracked range

# Merge stats from parallel workers.
combined = stats_a + stats_b

Field-level access is available via properties: total, unary, gamma, delta, omega, vbyte, zeta, golomb, exp_golomb, rice, pi. The array properties (zeta, golomb, etc.) return a list of bit costs, one per parameter value.

Dynamic code dispatch with Code

Code wraps the Rust Codes enum, letting you select a code at runtime and use it to read, write, or compute bit lengths:

from dsi_bitstream import Code, BitWriterBigEndian, BitReaderBigEndian

code = Code.zeta(3)

w = BitWriterBigEndian("out.bin")
bits = code.write(w, 42)  # returns number of bits written
w.flush()

r = BitReaderBigEndian("out.bin")
val = code.read(r)        # returns 42

Available constructors: Code.unary(), Code.gamma(), Code.delta(), Code.omega(), Code.vbyte_le(), Code.vbyte_be(), Code.zeta(k), Code.pi(k), Code.golomb(b), Code.exp_golomb(k), Code.rice(log2_b).

Parse from strings: Code.parse("Zeta(3)"). Equivalent codes compare equal: Code.zeta(1) == Code.gamma(). Use code.canonicalize() to normalize.

Code length functions

Compute the bit length of a code for a given value without writing to a stream:

from dsi_bitstream import len_gamma, len_zeta, len_delta

len_gamma(42)      # 11
len_zeta(100, 3)   # 11
len_delta(7)       # 8

Also available: len_unary, len_omega, len_pi, len_rice, len_golomb, len_exp_golomb, len_minimal_binary.

The same is available via Code.len():

code = Code.zeta(3)
code.len(100)  # 11 -- same as len_zeta(100, 3)

Building

With Nix (recommended)

The repository includes a flake.nix with two package outputs:

# Native wheel (linux tag, for local use)
nix build .#default.dist

# manylinux2014 wheel (PyPI-uploadable, uses zig as linker)
nix build .#manylinux.dist

# in either cases the wheel will be in:
ls result-dist/dsi_bitstream-*.whl

The manylinux wheel is built with maturin --zig, which links against glibc 2.17 headers shipped by zig, and verified with auditwheel during the build.

A dev shell is also available:

nix develop
maturin develop  # build & install in-place for development

Without Nix

pip install maturin
maturin develop          # development build
maturin build --release  # release wheel