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PyTorch DataLoader with dynamic batch sizing guided by a pre-trained GPU memory regressor.

Project description

dynabatch

PyPI version Python >=3.10 License: MIT Tests

Use more of your GPU on variable-length text generation.

Long inputs force small safe batches. Later, shorter inputs could often fit more examples, but most loaders keep using the same conservative batch size. dynabatch grows those later batches automatically.

dynabatch grows batch size as sequences get shorter

dynabatch is a drop-in PyTorch batch sampler for variable-length text workloads. It starts with max-token-style length sorting, then uses a pre-trained regressor to increase batch size on easier, shorter batches while keeping predicted memory pressure below the first, hardest batch.

Quick Start

Install:

pip install dynabatch

Use it as a DataLoader batch sampler. Omit batch_size from DataLoader; the sampler controls batch sizes.

from datasets import Dataset
from torch.utils.data import DataLoader
from transformers import AutoTokenizer
from dynabatch import dynabatch_sampler

texts = [
    "Very Short text " * 1,
    "Short text " * 2,
    "Medium text " * 8,
    "Long text " * 32,
    "Very long text " * 64,
] * 3

dataset = Dataset.from_dict({"text": texts})
tokenizer = AutoTokenizer.from_pretrained("google/flan-t5-small")

def collate_fn(batch):
    batch_texts = [x["text"] for x in batch]
    return tokenizer(batch_texts, padding=True, truncation=True, return_tensors="pt")

sampler = dynabatch_sampler(texts, tokenizer, batch_size=3, max_input_token_length=128, keep_batch_size_even=False)
loader = DataLoader(dataset, batch_sampler=sampler, collate_fn=collate_fn)

for i, batch in enumerate(loader):
    print(f"Batch No: {i} | Batch size: {len(batch['input_ids'])}")

Or use build_dynabatch_dataloader(texts, tokenizer, batch_size=1, max_input_token_length=64) for a built-in loader.

Results

These are workload-specific results, not a universal speedup claim. dynabatch helps most when variable sequence lengths leave memory headroom unused.

Workload Hardware Baseline dynabatch Notebook Notes
Inference generate() Colab T4 max-token sampler 1.06×-1.21× inference Colab Smaller gain: T4 has less compute headroom, so larger batches help less
Seq2Seq training RTX 5090 fixed batch 3.3× training notebook Larger gain: the 5090 has much more compute headroom, so growing shorter batches improves utilization
  1. Inference generate()

Inference generate comparison graph

  1. Seq2Seq training

Training comparison chart

Should You Use It?

Use dynabatch if:

  • you run encoder-decoder generation or training, especially translation-style workloads
  • input lengths vary a lot
  • a few long examples force a small safe batch size
  • shorter examples later in the dataset leave GPU memory or compute underused

Probably skip it if:

  • you are using decoder-only LLMs where sequence packing is the better first optimization
  • your workload is already compute-bound at the smallest safe batch size
  • input length is a poor proxy for generation cost

To sanity-check your workload, compare dynamic_batch_mode=True against dynamic_batch_mode=False. If both behave similarly, batching is probably not your bottleneck.

Tuning For More Throughput

Start with the largest batch_size that safely fits your longest inputs. That first hard batch becomes the baseline budget; the dynamic settings control how aggressively later, shorter batches can grow.

Parameter Current Increase or change it when Risk OOM
max_batch_range 2.0 Shorter examples could fit much larger batches than your baseline. Can pick overly aggressive batch sizes if set too high.
threshold 0.9 You want dynabatch to accept batches closer to the first-batch memory budget. Higher OOM risk if the regressor underestimates memory.

Also check nvidia-smi if more batches could fit in.

➕ More Examples

Compare dynamic vs static batching

from torch.utils.data import DataLoader
from dynabatch import dynabatch_sampler

kw = dict(texts=texts, tokenizer=tokenizer, batch_size=32, max_input_token_length=256)
dynamic = DataLoader(
    dataset,
    batch_sampler=dynabatch_sampler(**kw, dynamic_batch_mode=True),
    collate_fn=collate_fn,
)
static = DataLoader(
    dataset,
    batch_sampler=dynabatch_sampler(**kw, dynamic_batch_mode=False),
    collate_fn=collate_fn,
)

dynamic_batch_mode=False behaves like Max Token Sampler/Batching without the regressor-driven dynamic resizing. In other words, dynabatch is:

  • Max Token Sampler/Batching
  • plus optional dynamic batch growth on top

That makes dynamic_batch_mode=False useful as a sanity check.

OOM-safe generation with fallback splitting

The regressor is empirical, so it can still occasionally predict a batch size that turns out too aggressive for a specific model, prompt template, GPU state, or generation setting. generate_with_oom_fallback() lets you keep the run alive by splitting only the failed batch into smaller chunks.

import torch
from torch.utils.data import DataLoader
from dynabatch import dynabatch_sampler, generate_with_oom_fallback

loader = DataLoader(
    dataset,
    batch_sampler=dynabatch_sampler(texts, tokenizer, batch_size=32, max_input_token_length=256),
    collate_fn=collate_fn,
)
device = torch.device("cuda")

with torch.inference_mode():
    for batch in loader:
        generated_tokens, did_fallback = generate_with_oom_fallback(
            model, batch, min_batch_size=32, device=device, max_new_tokens=128,
        )

        if did_fallback:
            print("Fallback path used for this batch after an OOM.")

This is useful when you want throughput from dynamic batching without letting one occasional OOM kill a long inference run.

Training-style usage

For training:

  • if you want hardware friendly sizes (2^n or 3 * 2^n), enable friendly_batch_size=True
  • if you want to avoid odd batch sizes, keep keep_batch_size_even=True (default)
  • if you want shuffled batches, set shuffle=True
  • shuffle_keep_first_n=3 means the first 3 hardest batches stay unshuffled and only the later batches are shuffled
  • keeping the earliest hardest batches fixed is useful because it lets you hit the worst memory cases early and find OOM problems sooner
from torch.utils.data import DataLoader
from dynabatch import dynabatch_sampler

train_loader = DataLoader(
    dataset,
    batch_sampler=dynabatch_sampler(
        texts,
        tokenizer,
        batch_size=16,
        max_input_token_length=256,
        friendly_batch_size=True,
        shuffle=True,
        shuffle_keep_first_n=3,
    ),
    collate_fn=collate_fn,
)

Hugging Face Trainer integration (plug-and-play)

If you train with Hugging Face Trainer, use the trainer helpers so you do not have to manually inject:

  • get_train_dataloader() override for batch_sampler
  • compute_loss() reweighting for variable micro-batch sizes under gradient accumulation
from transformers import Seq2SeqTrainer # Seq2SeqTrainer  as
from dynabatch import (
    dynabatch_sampler,
    make_dynabatch_trainer,
    MemoryCleanupCallback,
)

sampler = dynabatch_sampler(
    texts=train_texts,
    tokenizer=tokenizer,
    batch_size=8,
    max_input_token_length=512,
    shuffle=True,
)

DynabatchSeq2SeqTrainer = make_dynabatch_trainer(Seq2SeqTrainer)

trainer = DynabatchSeq2SeqTrainer(
    dynabatch_sampler=sampler,
    model=model,
    args=training_args,
    train_dataset=train_dataset,
    eval_dataset=eval_dataset,
    data_collator=data_collator,
    callbacks=[MemoryCleanupCallback()],
)

When this is a good fit:

  • You use a Hugging Face trainer class and want dynamic batching without custom trainer boilerplate.
  • gradient_accumulation_steps > 1 and micro-batch sizes vary by step.
  • You want fairer baseline-vs-dynabatch comparisons where fewer dynabatch steps can otherwise change the effective LR schedule.

Why loss reweighting exists:

  • With variable micro-batch sizes, a plain accumulated loss can bias optimizer updates toward steps with smaller/larger batch sizes.
  • Dynabatch rescales each micro-batch by current_batch_size / per_device_train_batch_size so contribution is closer to sample-count-weighted behavior.

When to enable LR auto-scaling (Off by default):

  • You are comparing against an older fixed-batch trainer/collator setup and want similar effective optimization signal per epoch.
  • DynaBatch significantly reduces steps-per-epoch and you want a linear-scaling-style correction.
trainer = DynabatchSeq2SeqTrainer(..., auto_scale_lr=True)

Power-user options:

  • Use DynabatchTrainerMixin directly if you need custom multiple inheritance: class MyTrainer(DynabatchTrainerMixin, Seq2SeqTrainer): ...
  • Use scale_lr_for_dynabatch(args, sampler, dataset_size) as a standalone helper if you want explicit LR control outside trainer construction.
  • For non-text modalities, set batch_size_key=... (for example "pixel_values") so batch-size extraction in compute_loss() reads the right tensor.

OOM fallback options:

  • oom_fallback="split_retry": on torch.cuda.OutOfMemoryError during training_step, retry the same step in smaller chunks and keep as many samples as possible.
  • oom_fallback="skip": clear memory and skip the failing step by returning a zero loss.
  • oom_fallback=None: (default) disable fallback and re-raise OOM immediately.
  • oom_min_batch_size: chunk size used by split-retry. If unset, the trainer uses dynabatch_sampler.min_batch_size.
  • Every handled OOM increments an oom_failed counter and logs it via Trainer.log(...), so it appears in Trainer/TQDM progress metrics.
trainer = DynabatchSeq2SeqTrainer(
    ...,
    oom_fallback="split_retry",  # "split_retry" | "skip" | None
    oom_min_batch_size=2,
)

API

dynabatch_sampler

Returns a DynaBatchSampler for DataLoader(..., batch_sampler=sampler). The dataset indices must match texts.

dynabatch_sampler(
    texts: list[str],
    tokenizer: PreTrainedTokenizerBase,
    batch_size: int,
    max_input_token_length: int = 512,
    **kwargs,
) -> DynaBatchSampler

build_dynabatch_dataloader

Same batching as dynabatch_sampler, but returns a DataLoader with built-in tokenizer collation.

build_dynabatch_dataloader(
    texts: list[str],
    tokenizer: PreTrainedTokenizerBase,
    batch_size: int,
    max_input_token_length: int = 512,
    **tokenizer_kwargs,
) -> DataLoader

Common options:

Option Why you might change it
batch_size Set this to the largest safe batch size for your longest inputs.
threshold Lower it for more conservative dynamic growth; 1.0 means roughly as memory-heavy as the first batch.
max_batch_range Caps how much larger later batches can get relative to batch_size.
dynamic_batch_mode Turn off to compare against max-token batching without regressor-driven resizing.
shuffle / shuffle_keep_first_n Shuffle built batches while keeping the first hardest batches fixed for early OOM detection.
friendly_batch_size Round chosen batch sizes to hardware-friendly values like powers of two.
token_lengths, word_lengths, char_lengths Provide precomputed lengths to skip the upfront length pass.

Trainer helpers

make_dynabatch_trainer(trainer_cls: type) -> type
scale_lr_for_dynabatch(
    args: Any,
    sampler: DynaBatchSampler,
    dataset_size: int,
    baseline_batch_size: int | None = None,
) -> Any
class DynabatchTrainerMixin
  • make_dynabatch_trainer: builds a cached subclass combining DynabatchTrainerMixin with your trainer class.
  • DynabatchTrainerMixin: overrides train dataloader + loss reweighting for variable micro-batch sizes, and adds optional OOM fallback in training_step.
  • scale_lr_for_dynabatch: standalone helper mainly for fair fixed-vs-dynabatch comparisons; keep it off for normal training unless you explicitly want step-count-based LR adjustment.

How It Works

  1. All texts are tokenized up front to estimate truncated token, word, and character lengths.
  2. Samples are sorted by token length from longest to shortest. This part alone is essentially Max Token Sampler/Batching.
  3. The first batch uses exactly batch_size items. This is the hardest batch and becomes the baseline.
  4. For every later batch, dynabatch builds candidate batch sizes from batch_size up to batch_size * max_batch_range.
  5. A pre-trained XGBRegressor predicts memory pressure for each candidate relative to the first batch.
  6. dynabatch chooses the largest candidate whose predicted load is less than or equal to threshold.
  7. If dynamic_batch_mode=False, step 5 and step 6 are skipped and the pipeline reduces to Max Token Sampler/Batching with fixed batch size.

The important intuition is:

  • around 1.0 means "about as memory heavy as the first batch"
  • below 1.0 means lighter than the first batch
  • above 1.0 means heavier than the first batch and therefore riskier

So you should choose batch_size as the largest batch of your longest inputs that safely fits on your GPU. The regressor then tries to grow from there when the later inputs get shorter.

Regressor Training

The detailed training pipeline and notebook notes live in train_regressor/readme.md. That document explains how the GPU-memory data is generated, how the XGBRegressor training rows are built, and the current caveat that new v2-style generation is NLLB-only for now; existing v1 ALMA/Marian data is still usable but not fully reproducible from the current notebook config.

In short:

  • the training data stores real GPU memory usage from many batch configurations
  • the target is memory usage relative to the first batch
  • the notebook trains an XGBRegressor to predict that ratio from token, word, and character statistics of the baseline batch and candidate batch

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