OLS Ontologies loader
Provide class based client for accessing OLS RestAPI from EMBL-EBI
Install
with pip
pip install ebi-ols-client
See: https://www.ebi.ac.uk/ols/docs/api for more information on OLS API
Main files
- ebi.ols.api.client.py: contains main classes to access OLS via HAL schema.
- ebi.ols.api.helpers.py: data tranfer object loaded from API calls
How to use
from ebi.ols.api.client import OlsClient
client = OlsClient()
ontology = client.ontology('fpo')
terms = ontology.terms()
individuals = ontology.individuals()
properties = ontology.properties()
# work with all 'list' item types (terms, individuals, properties
for term in terms:
# do whatever
print(term)
# Direct List'like access on all list types
term = terms[1254]
individual = individuals[123]
# ...
Contribute
Please do ! If you need to run tests locally, add to your virtual env requirements-dev.txt content.None
pip install -r requirements.txt
pip install -r requirements-dev.txt
# to run tests
nosetests --withcoverage
3 maintainers
Metadata
3 maintainers
Release files for ebi-ols-client 1.1.0
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Source distribution (sdist)
| File | Size | Uploaded | |
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| ebi-ols-client-1.1.0.tar.gz | 15.7 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| ebi_ols_client-1.1.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 35.0 kB
Release files / ebi-ols-client-1.1.0.tar.gz
| Download URL | ebi-ols-client-1.1.0.tar.gz |
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| Size | 15.7 kB |
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Release files / ebi_ols_client-1.1.0-py3-none-any.whl
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