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Usage

Installation

pip install EcoInteract

Quick Start

The main function exposed by this library is get_interaction_data, available in the getgraph module.

get_interaction_data

Builds the interaction graph for a target species.

Signature:

get_interaction_data(
    target_species: str,
    search_depth: int = 3,
    interaction_type: str | list[str] | None = None,
) -> nx.DiGraph | None

Example:

from EcoInteract import get_interaction_data

# Fetch interaction data for a species
data = get_interaction_data(target_species="wolf")

# With custom depth and interaction types
data = get_interaction_data(
    target_species="wolf",
    search_depth=5,
    interaction_type=["predation", "competition"]
)

Parameters:

  • target_species (str): The species to search interactions for
  • search_depth (int): Depth of the interaction graph traversal (default: 3)
  • interaction_type (str | list[str] | None): Filter by interaction type(s). If None, returns all interactions

Returns:

  • A directed graph (nx.DiGraph) containing ecological relationships, or None if no interactions are found

Documentation

For more information, refer to the module docstrings and source code.

Metadata

Release files for ecointeract 0.1.3

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