Skip to main content

Add a diabetic retinopathy screening form and API to use with a fundus camera for clinicedc

Project description

pypi actions codecov downloads clinicedc

edc-retinopathy

Add a diabetic retinopathy screening form and REST API for integrating with a fundus camera in a clinicedc project.

A clinician creates a CameraSession in the EDC before the exam. The camera software (fundus-camera-watchdog) resolves the subject, uploads eye images, DICOM files and reports, then checks status.

Requires django>=5.2,<6.1 and djangorestframework>=3.16.0

REST API

All endpoints use TokenAuthentication.

GET /api/retinopathy/ping/

Health check. Returns {"status": "ok"}.

POST /api/retinopathy/resolve/

Confirm a CameraSession exists for a subject. Payload:

{"subject_identifier": "105-10-0001-2"}

Returns 200 with camera_session_id and uploaded list, or 404 if no session exists.

POST /api/retinopathy/<subject_identifier>/<file_type>/

Upload a file. Multipart form with file, capture_datetime, and optional checksum (SHA-256). Valid file types:

  • left, right – eye images (JPEG/PNG)

  • left_dicom, right_dicom – DICOM files

  • left_report, right_report, report – reports (PDF/HTML)

Multiple files per type are accepted. Files are stored with their original filenames under <storage_dir>/images/<session_pk>/.

GET /api/retinopathy/<subject_identifier>/status/

Session status: uploaded types, missing types, and whether the session is complete.

Models

CameraSession

Created by the clinician in the EDC. Links to RegisteredSubject and stores contra-indication screening fields, report type (combined / per-eye), and device ID.

SessionFile

One record per uploaded file. Tracks file type, original filename, stored path, content type, size, SHA-256 checksum, and capture timestamp.

Settings

EDC_RETINOPATHY_STORAGE_DIR

Base path for file storage. Must contain an images/ subdirectory.

EDC_RETINOPATHY_MAX_FILE_SIZE_MB

Maximum upload size in MB (default: 10).

See also https://edc-retinopathy.readthedocs.io/en/latest/

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

edc_retinopathy-0.7.0.tar.gz (32.8 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

edc_retinopathy-0.7.0-py3-none-any.whl (62.6 kB view details)

Uploaded Python 3

File details

Details for the file edc_retinopathy-0.7.0.tar.gz.

File metadata

  • Download URL: edc_retinopathy-0.7.0.tar.gz
  • Upload date:
  • Size: 32.8 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: uv/0.11.19 {"installer":{"name":"uv","version":"0.11.19","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"macOS","version":null,"id":null,"libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":null}

File hashes

Hashes for edc_retinopathy-0.7.0.tar.gz
Algorithm Hash digest
SHA256 dea1946984fa0027a69af0c6e9c144f0c11e5094e5c4426352be849be80fd765
MD5 83234a2a43119c6bd4e4f54f903a1455
BLAKE2b-256 cae0ba34d126e441b559d0fa4d1eb4555a9ee2358c69dbe09b2eb500e1201c03

See more details on using hashes here.

File details

Details for the file edc_retinopathy-0.7.0-py3-none-any.whl.

File metadata

  • Download URL: edc_retinopathy-0.7.0-py3-none-any.whl
  • Upload date:
  • Size: 62.6 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: uv/0.11.19 {"installer":{"name":"uv","version":"0.11.19","subcommand":["publish"]},"python":null,"implementation":{"name":null,"version":null},"distro":{"name":"macOS","version":null,"id":null,"libc":null},"system":{"name":null,"release":null},"cpu":null,"openssl_version":null,"setuptools_version":null,"rustc_version":null,"ci":null}

File hashes

Hashes for edc_retinopathy-0.7.0-py3-none-any.whl
Algorithm Hash digest
SHA256 893fe3c346bd2f91ac87d5213b0cfd29cef632931e83471d0a48ff82298d80a0
MD5 b9278b6a69ae8d78f41f3c1876798117
BLAKE2b-256 58a5ac12ff62b2c4d3f6fd13da931556de61489b690a95b4d0694272a78450f6

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page