Skip to main content

Download Studies from an Experiment Data Depot Instance

Project description

EDD Utils

This package is a utility for downloading Experiment Data Depot study instances through python or the commandline. It was coded and is to be used in Python 3.6+. The package can be installed on your system through pip via the command

pip install edd-utils

The package has two entry points, either as a commandline utility or as a python module. The commandline utility is used as below:

$ export_edd_study my_edd_study_slug --username my_edd_username --server my.edd.server.org

For an example of how to use the python module see the jupyter notebook in the notebooks directory.

Note: The progressbar functionality will run correctly on JupyterLab v0.35.6 with enabled jupyterlab-manager labextension, which can be installed by

 jupyter labextension install @jupyter-widgets/jupyterlab-manager

Login credentials can also be provided in a configuration file, ~/.eddrc:

[edd.server1.org]
username: my_user_name1
password: my_password1

[edd.server2.org]
username: my_user_name2
password: my_password2

License

edd-utils is available under the BSD-3-Clause-LBNL license.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

edd-utils-0.0.12.tar.gz (5.1 kB view hashes)

Uploaded source

Built Distribution

edd_utils-0.0.12-py3-none-any.whl (6.6 kB view hashes)

Uploaded py3

Supported by

AWS AWS Cloud computing Datadog Datadog Monitoring Facebook / Instagram Facebook / Instagram PSF Sponsor Fastly Fastly CDN Google Google Object Storage and Download Analytics Huawei Huawei PSF Sponsor Microsoft Microsoft PSF Sponsor NVIDIA NVIDIA PSF Sponsor Pingdom Pingdom Monitoring Salesforce Salesforce PSF Sponsor Sentry Sentry Error logging StatusPage StatusPage Status page