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EEG Phrase Predictor ver 3

Project description

EEG Phase Predictor ver 2

**Note: This is beta version, use for training with default dataset and inference only

Setup

  • Requirements: python >= 3.10
  • Installing:
  pip install eegpp3-beta

Train with default dataset

    python -m eegpp3 --mode "train" --model_type <mode_type> --lr <learning_rate> --batch_size <batch_size> --n_epochs <num_epochs> --n_splits <num_folds> --resume_checkpoint <resume_from_checkpoint>

ex: python -m eegpp3 --mode "train" --model_type "stftcnn1dnc" --n_epochs 20 --n_splits 10 --resume_checkpoint False

Inference

  1. Old version (Recommend)
    python -m eegpp3 -p <path_to_infer_config.yml>

ex: python -m eegpp3 -p "data_config_infer.yml"

An example of the configuration file:

datasets:
  time_step: 4000 #milliseconds
  data_dir: "/home/user/data"
  tmp_dir: "/home/user/tmp"
  out_dir: "/home/user/out"
  seq_files: ["raw_K3_EEG3_11h.txt", "raw_RS2_EEG1_23 hr.txt"]
  template_files: [] # ["K3_EEG3_11h.txt", "RS2_EEG1_23 hr.txt", "S1_EEG1_23 hr.txt"] # if no template, set to : [ ] or remove this line
  out_seperator: "\t"

Change directory (dir) with the correct path 2. New version

  python -m eegpp3 --mode "infer" --data_path <path_to_data_file> --infer_path <path_to_saving_file> --model_type <model_type>

ex: python -m eegpp3 --mode "infer" --data_path "./dump_eeg_1.pkl" --infer_path './inference_result.txt" --model_type "stftcnn1dnc"

Model type

  • stftcnn1dnc: Multi-channels STFT-CNN

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