EHRT - Electornic Health Records Toolkit
Project description
ehrt
ehrt is a set of foundational tools and pipelines for processing EHR data to create research ready datasets. TETHER is a learning library designed to help analysts and healthcare professionals familiarize themselves with EHR processing.
Installation
Install via pip
Usage
from ehrt import nlp
# Example text and dictionary
text = "This is an example input to process."
dictionary_path = "sample_dict.txt"
# The dictionary should can be a csv file containg two columns: string,cui
# Traverse the text to find CUIs
result = nlp.text2cui.traverse(text, dictionary_path)
print(result)
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