Eikonal Fast Marching
eikonalfm is a Python (C++) extension which implements the Fast Marching method for the eikonal equation
$$ \lvert\nabla\tau(x)\rvert^2=\frac{1}{c^2(x)}, $$
and the factored eikonal equation
$$ \lvert(\tau_0\nabla\tau_1 + \tau_1\nabla\tau_0)(x)\rvert^2=\frac{1}{c^2(x)}, $$
where $\tau_0(x)=\lvert x-x_s\rvert$.
References
- J. Sethian. Fast marching methods. SIAM Review, 41(2):199-235, 1999. doi: 10.1137/S0036144598347059. URL https://doi.org/10.1137/S0036144598347059
- Eran Treister and Eldad Haber. A fast marching algorithm for the factored eikonal equation. Journal of Computational Physics, 324:210-225, 2016.
Requirements
- Python 3
- numpy version 1.7 or higher
- C++11 compiler
Installation
Installation from PyPi:
pip install eikonalfm
Manual install from the repository:
git clone https://github.com/kevinganster/eikonalfm.git
cd eikonalfm
pip install .
or
pip install git+https://github.com/kevinganster/eikonalfm.git
Examples
import numpy as np
import eikonalfm
c = np.ones((100, 100))
x_s = (0, 0)
dx = (1.0, 1.0)
order = 2
tau_fm = eikonalfm.fast_marching(c, x_s, dx, order)
tau1_ffm = eikonalfm.factored_fast_marching(c, x_s, dx, order)
Note that the source position x_s describes an index-vector.
To visualize the results, matplotlib (https://pypi.org/project/matplotlib/) can be used, for example:
import matplotlib.pyplot as plt
# for the distance-function 'x_s' also describes an index-vector
tau0 = eikonalfm.distance(tau1_ffm.shape, dx, x_s, indexing="ij")
plt.contourf(tau0 * tau1_ffm)
plt.show()
1 maintainer
Metadata
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Release files for eikonalfm 0.9.9
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Source distribution (sdist)
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Built distributions (wheels)
Total release size: 20.2 MB
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Release files / eikonalfm-0.9.9-cp312-cp312-macosx_11_0_arm64.whl
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BLAKE2b-256 checksum How to use checksums |
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twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp312-cp312-macosx_10_13_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp312-cp312-macosx_10_13_x86_64.whl |
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| Size | 34.1 kB |
| Tags | CPython 3.12 macOS 10.13+ x86-64 |
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No |
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twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp312-cp312-macosx_10_13_universal2.whl
| Download URL | eikonalfm-0.9.9-cp312-cp312-macosx_10_13_universal2.whl |
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| Size | 50.1 kB |
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twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp311-cp311-win_amd64.whl
| Download URL | eikonalfm-0.9.9-cp311-cp311-win_amd64.whl |
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| Size | 34.6 kB |
| Tags | CPython 3.11 Windows x86-64 |
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No |
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twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp311-cp311-win32.whl
| Download URL | eikonalfm-0.9.9-cp311-cp311-win32.whl |
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| Size | 31.9 kB |
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BLAKE2b-256 checksum How to use checksums |
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No |
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Release files / eikonalfm-0.9.9-cp311-cp311-musllinux_1_2_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp311-cp311-musllinux_1_2_x86_64.whl |
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| Size | 1.2 MB |
| Tags | CPython 3.11 Linux musl 1.2+ x86-64 |
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BLAKE2b-256 checksum How to use checksums |
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No |
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twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp311-cp311-musllinux_1_2_aarch64.whl
| Download URL | eikonalfm-0.9.9-cp311-cp311-musllinux_1_2_aarch64.whl |
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| Size | 1.1 MB |
| Tags | CPython 3.11 Linux musl 1.2+ ARM64 |
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BLAKE2b-256 checksum How to use checksums |
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No |
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twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl |
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| Size | 177.3 kB |
| Tags | CPython 3.11 Linux glibc 2.24+ x86-64 Linux glibc 2.28+ x86-64 |
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twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp311-cp311-manylinux_2_24_aarch64.manylinux_2_28_aarch64.whl
| Download URL | eikonalfm-0.9.9-cp311-cp311-manylinux_2_24_aarch64.manylinux_2_28_aarch64.whl |
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| Size | 176.1 kB |
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No |
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twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp311-cp311-macosx_11_0_arm64.whl
| Download URL | eikonalfm-0.9.9-cp311-cp311-macosx_11_0_arm64.whl |
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| Size | 33.4 kB |
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No |
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Release files / eikonalfm-0.9.9-cp311-cp311-macosx_10_9_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp311-cp311-macosx_10_9_x86_64.whl |
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| Size | 33.8 kB |
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No |
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Release files / eikonalfm-0.9.9-cp311-cp311-macosx_10_9_universal2.whl
| Download URL | eikonalfm-0.9.9-cp311-cp311-macosx_10_9_universal2.whl |
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| Size | 49.9 kB |
| Tags | CPython 3.11 macOS 10.9+ universal2 (ARM64, x86-64) |
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No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp310-cp310-win_amd64.whl
| Download URL | eikonalfm-0.9.9-cp310-cp310-win_amd64.whl |
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| Size | 34.6 kB |
| Tags | CPython 3.10 Windows x86-64 |
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No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp310-cp310-win32.whl
| Download URL | eikonalfm-0.9.9-cp310-cp310-win32.whl |
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| Size | 31.9 kB |
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No |
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Release files / eikonalfm-0.9.9-cp310-cp310-musllinux_1_2_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp310-cp310-musllinux_1_2_x86_64.whl |
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| Size | 1.2 MB |
| Tags | CPython 3.10 Linux musl 1.2+ x86-64 |
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No |
| Uploaded via |
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Release files / eikonalfm-0.9.9-cp310-cp310-musllinux_1_2_aarch64.whl
| Download URL | eikonalfm-0.9.9-cp310-cp310-musllinux_1_2_aarch64.whl |
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| Size | 1.1 MB |
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No |
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Release files / eikonalfm-0.9.9-cp310-cp310-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp310-cp310-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl |
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| Size | 176.4 kB |
| Tags | CPython 3.10 Linux glibc 2.24+ x86-64 Linux glibc 2.28+ x86-64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp310-cp310-manylinux_2_24_aarch64.manylinux_2_28_aarch64.whl
| Download URL | eikonalfm-0.9.9-cp310-cp310-manylinux_2_24_aarch64.manylinux_2_28_aarch64.whl |
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| Size | 175.2 kB |
| Tags | CPython 3.10 Linux glibc 2.24+ ARM64 Linux glibc 2.28+ ARM64 |
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No |
| Uploaded via |
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Release files / eikonalfm-0.9.9-cp310-cp310-macosx_11_0_arm64.whl
| Download URL | eikonalfm-0.9.9-cp310-cp310-macosx_11_0_arm64.whl |
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| Size | 33.4 kB |
| Tags | CPython 3.10 macOS 11.0+ ARM64 |
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No |
| Uploaded via |
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Release files / eikonalfm-0.9.9-cp310-cp310-macosx_10_9_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp310-cp310-macosx_10_9_x86_64.whl |
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| Size | 33.8 kB |
| Tags | CPython 3.10 macOS 10.9+ x86-64 |
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No |
| Uploaded via |
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Release files / eikonalfm-0.9.9-cp310-cp310-macosx_10_9_universal2.whl
| Download URL | eikonalfm-0.9.9-cp310-cp310-macosx_10_9_universal2.whl |
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| Size | 49.9 kB |
| Tags | CPython 3.10 macOS 10.9+ universal2 (ARM64, x86-64) |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp39-cp39-win_amd64.whl
| Download URL | eikonalfm-0.9.9-cp39-cp39-win_amd64.whl |
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| Size | 34.6 kB |
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No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp39-cp39-win32.whl
| Download URL | eikonalfm-0.9.9-cp39-cp39-win32.whl |
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| Size | 31.9 kB |
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No |
| Uploaded via |
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Release files / eikonalfm-0.9.9-cp39-cp39-musllinux_1_2_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp39-cp39-musllinux_1_2_x86_64.whl |
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| Size | 1.2 MB |
| Tags | CPython 3.9 Linux musl 1.2+ x86-64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
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Release files / eikonalfm-0.9.9-cp39-cp39-musllinux_1_2_aarch64.whl
| Download URL | eikonalfm-0.9.9-cp39-cp39-musllinux_1_2_aarch64.whl |
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| Size | 1.1 MB |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp39-cp39-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp39-cp39-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl |
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| Size | 176.2 kB |
| Tags | CPython 3.9 Linux glibc 2.24+ x86-64 Linux glibc 2.28+ x86-64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp39-cp39-manylinux_2_24_aarch64.manylinux_2_28_aarch64.whl
| Download URL | eikonalfm-0.9.9-cp39-cp39-manylinux_2_24_aarch64.manylinux_2_28_aarch64.whl |
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| Size | 175.0 kB |
| Tags | CPython 3.9 Linux glibc 2.24+ ARM64 Linux glibc 2.28+ ARM64 |
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No |
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twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp39-cp39-macosx_11_0_arm64.whl
| Download URL | eikonalfm-0.9.9-cp39-cp39-macosx_11_0_arm64.whl |
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| Size | 33.4 kB |
| Tags | CPython 3.9 macOS 11.0+ ARM64 |
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No |
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Release files / eikonalfm-0.9.9-cp39-cp39-macosx_10_9_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp39-cp39-macosx_10_9_x86_64.whl |
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| Size | 33.8 kB |
| Tags | CPython 3.9 macOS 10.9+ x86-64 |
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No |
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twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp39-cp39-macosx_10_9_universal2.whl
| Download URL | eikonalfm-0.9.9-cp39-cp39-macosx_10_9_universal2.whl |
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| Size | 49.9 kB |
| Tags | CPython 3.9 macOS 10.9+ universal2 (ARM64, x86-64) |
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No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp38-cp38-win_amd64.whl
| Download URL | eikonalfm-0.9.9-cp38-cp38-win_amd64.whl |
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| Size | 34.5 kB |
| Tags | CPython 3.8 Windows x86-64 |
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No |
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twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp38-cp38-win32.whl
| Download URL | eikonalfm-0.9.9-cp38-cp38-win32.whl |
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| Size | 31.7 kB |
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No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp38-cp38-musllinux_1_2_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp38-cp38-musllinux_1_2_x86_64.whl |
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| Size | 1.2 MB |
| Tags | CPython 3.8 Linux musl 1.2+ x86-64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp38-cp38-musllinux_1_2_aarch64.whl
| Download URL | eikonalfm-0.9.9-cp38-cp38-musllinux_1_2_aarch64.whl |
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| Size | 1.1 MB |
| Tags | CPython 3.8 Linux musl 1.2+ ARM64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp38-cp38-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp38-cp38-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl |
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| Size | 177.4 kB |
| Tags | CPython 3.8 Linux glibc 2.24+ x86-64 Linux glibc 2.28+ x86-64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp38-cp38-manylinux_2_24_aarch64.manylinux_2_28_aarch64.whl
| Download URL | eikonalfm-0.9.9-cp38-cp38-manylinux_2_24_aarch64.manylinux_2_28_aarch64.whl |
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| Size | 176.2 kB |
| Tags | CPython 3.8 Linux glibc 2.24+ ARM64 Linux glibc 2.28+ ARM64 |
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BLAKE2b-256 checksum How to use checksums |
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No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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Release files / eikonalfm-0.9.9-cp38-cp38-macosx_10_9_x86_64.whl
| Download URL | eikonalfm-0.9.9-cp38-cp38-macosx_10_9_x86_64.whl |
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| Size | 33.5 kB |
| Tags | CPython 3.8 macOS 10.9+ x86-64 |
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BLAKE2b-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.13.7
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