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Species distribution modeling support tools

Project description

elapid

the amazon

Documentation: earth-chris.github.io/elapid

Source code: earth-chris/elapid


Introduction

elapid provides python support for species distribution modeling. This includes a custom MaxEnt implementation and general spatial processing tools. It will soon include tools for working with GBIF-format datasets.

The name is an homage to A Biogeographic Analysis of Australian Elapid Snakes (H.A. Nix, 1986), the paper widely credited with defining the essential bioclimatic variables to use in species distribution modeling. It's also a snake pun (a python wrapper for mapping snake biogeography).

The maxent modeling tools and feature transformations are translations of the R maxnet package. It uses the glmnet python bindings, and is implemented using sklearn conventions.

This package is still in the early stages of development.

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