This package is composed of two high-performance simulators:
A Ribosome simulator, that, given a codon and tRNA concentrations, simulates the internal reactions of the ribosome and their times. It can produce complete data about these reacions: The state of the ribosome, the time it took for each reaction to happen, their frequency, etc.
The other simulator is an elongation simulator: it simulates ribosomes intiating, elongating and terminating a given mRNA. It simulates collisions, ribosome stalling, etc. This tool can also perform simulations in parallel and produce complete information about all ribosomes, and their positions in the mRNA contruct.
Changes
1.0.0 (unreleased)
initial release
1 maintainer
Release files for elongation-simulators 1.0.5
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| elongation_simulators-1.0.5.tar.gz | 1.7 MB | Details |
Built distributions (wheels)
Total release size: 89.1 MB
Release files / elongation_simulators-1.0.5.tar.gz
| Download URL | elongation_simulators-1.0.5.tar.gz |
|---|---|
| Size | 1.7 MB |
| Tags | Source |
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Release files / elongation_simulators-1.0.5-cp312-cp312-win_amd64.whl
| Download URL | elongation_simulators-1.0.5-cp312-cp312-win_amd64.whl |
|---|---|
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Release files / elongation_simulators-1.0.5-cp312-cp312-win32.whl
| Download URL | elongation_simulators-1.0.5-cp312-cp312-win32.whl |
|---|---|
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Release files / elongation_simulators-1.0.5-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | elongation_simulators-1.0.5-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
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| Download URL | elongation_simulators-1.0.5-cp312-cp312-manylinux_2_17_i686.manylinux2014_i686.whl |
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| Download URL | elongation_simulators-1.0.5-cp39-cp39-win32.whl |
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twine/4.0.2 CPython/3.12.1
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Release files / elongation_simulators-1.0.5-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | elongation_simulators-1.0.5-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
|---|---|
| Size | 6.0 MB |
| Tags | CPython 3.6 CPython 3.6 pymalloc Linux glibc 2.17+ x86-64 |
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SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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twine/4.0.2 CPython/3.12.1
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Release files / elongation_simulators-1.0.5-cp36-cp36m-manylinux_2_17_i686.manylinux2014_i686.whl
| Download URL | elongation_simulators-1.0.5-cp36-cp36m-manylinux_2_17_i686.manylinux2014_i686.whl |
|---|---|
| Size | 6.0 MB |
| Tags | CPython 3.6 CPython 3.6 pymalloc Linux glibc 2.17+ x86-32 |
|
SHA-256 checksum How to use checksums |
787eed71d37b36d973a8ef87af555ff076c491d049326b86a1de2469c262da6f
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BLAKE2b-256 checksum How to use checksums |
a152a4734b7c3b12b5874dc8f2a4e4d54f75fbeae704c686ec254cb4d48f3d97
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No |
| Uploaded via |
twine/4.0.2 CPython/3.12.1
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