Ersilia Compound Embeddings
Project description
Ersilia Embeddings
A lite wrapper for Ersilia compound embeddings model.
Quick start guide
1. Clone the repository
git clone https://github.com/ersilia-os/compound-embedding-lite.git
cd compound-embedding-lite
2. Install the package with pip
pip install .
or if you have a GPU
pip install .[gpu]
3. Programatically generate embeddings
from eosce.models import ErsiliaCompoundEmbeddings
model = ErsiliaCompoundEmbeddings()
embeddings = model.transform(["CCOC(=O)C1=CC2=CC(OC)=CC=C2O1"])
4. Generate embeddings using the cli
eosce embed "CCOC(=O)C1=CC2=CC(OC)=CC=C2O1"
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