EphysPy

Package to extract electrophysiological features from current clamp experiments.

This package provides an API to extract a multitude of features from voltage clamp recordings with the help of the AllenSDK.

Installation

The package can be installed via pip install ephyspy. Alternatively, clone the package with https://github.com/berenslab/ephyspy.git and install using pip via pip install -e ./ephyspy.

Getting started

To get started see example.ipynb.

Documentation

All documentation can be found here.

Acknowledgments

This package builds on previous work by @ybernaerts, which was part of the Phenotypic variation of transcriptomic cell types in mouse motor cortex atlas and the AllenSDK.