Optimization and ML modeling package targeting EQC devices
Project description
EQC Models
Quick Reference
Installation
Install from the Python Package Index (PyPI) using
pip install eqc-models
For pre-release and source versions, install eqc-models by extracting the source package and running
pip install -e .
from the folder with the pyproject.toml file. This will create an editable installation that is local to your user environment.
Certain optimizations require extension modules, in particular eqc_models.base.polyeval. This is a C extension produced from
a Cython module which evaluates polynomial expressions. Since there could be thousands of terms, the C extension can greatly
improve performance of some algorithms. Installing from source with pip will build the module.
Modeling
Implement a model by selecting from the most appropriate model class from the available models and pass the required data. The model classes are (in depth first order by hierarchy)
eqc_models.base.EQCModel: a base class for all modelseqc_models.ml.classifierbase.ClassifierBase: a base model for machine learning classifier modelseqc_models.ml.classifierqboost.QBoostClassifier: a machine learning classifier model using QBoosteqc_models.ml.classifierqsvm.QSVMClassifier: a machine learning classifier model using QSVMeqc_models.ml.communitydetection.CommunityDetectionModel: a model for modeling community detection problemseqc_models.base.QuadraticModel: a base class for all models with up to quadratic termseqc_models.base.ConstrainedQuadraticModel: a base class for all models with up to quadratic objective functions and linear equality constraintseqc_models.base.PolynomialModel: a base class for all models that utilize a polynomial formulation (up to fifth order)eqc_models.allocation.AllocationModel: an allocation model with equality resource constraintseqc_models.allocation.AllocationModelX: an allocation model with equality and inequality resource constraintseqc_models.allocation.portmomentum.PortMomentum: a portfolio allocation momentum modeleqc_models.portbase.PortBase: a portfolio allocation base modeleqc_models.graph.MaxCutModel: a maximum cut modeleqc_models.assignment.qap.QAPModel: a quadratic assignment problem modeleqc_models.sequence.tsp.TSPModel: a base class for TSP modelseqc_models.sequence.tsp.MTZTSPModel: a traveling salesman model using the MTZ formulationeqc_models.utilities.qplib.QGLModel: a model based onConstrainedQuadraticModelto solve problems from qplib
Solvers
The hierarchy of solvers uses QciClient from the qci-client package. Both Dirac-1 and Dirac-3 can be accessed using these solvers. Specific classes exist for the devices.
eqc_models.qciclientsolver.Dirac1CloudSolver: A solver class that accesses Dirac-1 via the Qatalyst cloud serviceeqc_models.qciclientsolver.Dirac3ContinuousCloudSolver: A solver class for quasi-continuous models that accesses Dirac-3 via the Qatalyst cloud serviceeqc_models.qciclientsolver.Dirac3IntegerCloudSolver: A solver class for integer models that accesses Dirac-3 via the Qatalyst cloud service
Using Classifier Models
Use of classification models is based on the well known pattern of fitting a model, then
using the fitted model to predict classifications. Here is a snippet from the qsvm_iris_dirac3.py script:
# Get QSVM model
obj = QSVMClassifier(
relaxation_schedule=2,
num_samples=1,
upper_limit=1.0,
gamma=1.0,
eta=1.0,
zeta=1.0,
)
# Train
obj.fit(X_train, y_train)
y_train_prd = obj.predict(X_train)
y_test_prd = obj.predict(X_test)
Using Decision Optimization Models
Decision optimization models can be utilized by building a model, then passing the model to a solver's solve method. The following snippet of code is taken from the qplib_runner.py script.
# C, J are the linear and quadratic components of the expression
# A and b are left hand and right hand side values for linear constraints
# R is the summation constraint value for the Dirac-3 requirement
model = QGLModel(C, J, A, b)
domains = [R if types[j] == "REAL" else 1 for j in range(num_variables)]
model.domains = np.array(domains)
model.penalty_multiplier = alpha
# set the machine slacks to 1 to add a dummy variable to capture slack value from the summation constraint
model.machine_slacks = 1
print(f"Constructed model with R={R} alpha={alpha}")
solver = Dirac3CloudSolver()
print(f"Running model with relaxation_schedule={schedule}")
response = solver.solve(model, basename, sum_constraint=R, relaxation_schedule=schedule)
print(f"Energy {response['results']['energies'][0]}")
Design Overview
This package is designed around two central base classes. The first, EqcModel, includes the most basic common elements of an
optimization model. The second, ModelSolver, includes the most basic elements of a solver class. While not all classes in this package
inherit from one of these two classes, the core functionality exists in thie hierarchy. Additional things, such as algorithms and
supporting methods take advantage of these classes. Another design choice in the package is to utilize multiple inheritance and class
mixins for construction of functional classes. This design is not intended to impact the end user, who can simply instantiate a certain
model or solver class for usage. If a new model class is desired, the mixin design may be utilized to construct this new class.
Additionally, a hybrid solver could be implemented using this same design.
Troubleshooting Common Errors
No module named '_bz2' This error occurs because NetworkX, a dependency of eqc-models, requires the bzip 2 library and it has not been found. On some linux environments, the OS package libbzip2-dev can be installed with apt or yum, then the python environment must be installed again.
Further Information
Most of the classes in this package have doctests, see these docstrings for specific concrete examples. Also, the scripts and test directories have examples on modeling and solving with eqc-models.
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