\n#eSeq: process sequence
introduction
The tool known as eSeq can offer methods for process various sequences. Those sequence could be DNA, RNA, amino acid sequence, etc.
- Detect specific sequence, namely palindromic, similarity etc.
- Iterator of sequence
- Trim adapter from sequence.
- Detect motif
quick installation
pip install eseq
devlopment
Launch virtual environment.
git clone git@github.com:Tiezhengyuan/bio_sequence.git
cd bio_sequence
source venv/bin/activate
Run unit tests
pytest tests/unittests
Quick tour
import eseq
Metadata
Release files for eseq 0.0.4
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| eseq-0.0.4.tar.gz | 10.0 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| eseq-0.0.4-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 22.3 kB
Release files / eseq-0.0.4.tar.gz
| Download URL | eseq-0.0.4.tar.gz |
|---|---|
| Size | 10.0 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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No |
| Uploaded via |
twine/5.0.0 CPython/3.12.2
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Release files / eseq-0.0.4-py3-none-any.whl
| Download URL | eseq-0.0.4-py3-none-any.whl |
|---|---|
| Size | 12.3 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.0.0 CPython/3.12.2
|