ethograph
EthoGraph is a graphical user interface for visualizing and segmenting multimodal timeseries behavioural data. It builds upon a number of open-source libraries to load and quickly render video and pose files, audio and spectrograms, ephys recordings in various formats, and arbitrary multi-dimensional timeseries — all on one shared timeline.
Note this GUI is still in development. I welcome people testing it and providing feedback!
Quickstart
To install the GUI, run the following. For more detailed instructions, see the installation guide.
uv pip install "ethograph[gui,audio]" --python 3.12
To open the GUI, run:
ethograph launch
After launching, there are some example datasets you can explore the GUI with. To learn more about all the functionalities, I recommend the user manual.
Support
EthoGraph is built on top of a number of open-source projects: PyAV, audioio, Neo, crowsetta, Neurodata Without Borders, xarray, pynapple, movement, phy, PyQtGraph, and pygfx (via pynaviz).
1 maintainer
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