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Different file formats to FastQ, part of ExoClasma Suite

Project description

exoclasma-fastq

Description

exoclasma-fastq is a tool for conversion different types of files to Illumina-like FastQ, a part of upcoming ExoClasma Suite.

Features:

  • Convert Juicer merged_nodups.txt file to FastQ, keeping its annotation
  • Convert SRA to compressed FastQ via fastq-dump.

This is a pre-release. Use it at your own risk!

Installation

python3 -m pip install exoclasma-fastq

Command-line dependencies

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