data APIs for reproducible data fetching in cheminformatics
Project description
fairfetched
data APIs for reproducible data fetching in cheminformatics in line with FAIR principles
installation
you can install this package through
uv add fairfetched (recommended)
or if you do not use the uv package manager:
pip install fairfetched
roadmap
- papyrus database support
- papyrus latest version download
- simple nested filtering
- efficient nested filtering
- all-version support
- built-in pivots
- chembl database support
- database to tables (parquet)
- intuitive pre-merged flat files
- database visualisation
- reproducion from downloaded raw file
- reproducible molecular (and protein?) standardisation
- automated time-url logging and manifest files
- well-organised logging
- dependency minimisation
- other database support
- preservation of api and parsing logic per major version
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