FCS for Humans
FCSX: FCS for Humans
- a very simple but fully featured Flow Cytometry Standard (FCS) reader for Python.
- written in Python Standard Library
FCSX supports to
- parse FCS 2.0, 3.0, and 3.1 versions
- create NumPy memory-mapped array for the DATA segment via installing NumPy
pip install fcsx
To support NumPy memory mapping (usually faster), please install the extra dependencies as
pip install fcsx[numpy]
import fcs f = fcs.read('./FR-FCM-ZZPH/Samusik_all.fcs')
FCSX has an BSD-3-Clause license, as found in the LICENSE file.
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.