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FCS for Humans

Project description

FCSX: FCS for Humans


  • a very simple but fully featured Flow Cytometry Standard (FCS) reader for Python.
  • written in Python Standard Library

FCSX supports to

  • parse FCS 2.0, 3.0, and 3.1 versions
  • create NumPy memory-mapped array for the DATA segment via installing NumPy


pip install fcsx

To support NumPy memory mapping (usually faster), please install the extra dependencies as

pip install fcsx[numpy]

Quick Start

import fcs

f ='./FR-FCM-ZZPH/Samusik_all.fcs')



FCSX has an BSD-3-Clause license, as found in the LICENSE file.

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