FDA data cleaning and dataset creation tool
Project description
fdata
This tool is meant for the cleaning and creation of custom tables using FDA Adverse Event Reporting System (FAERS) data.
Download whichever quarterly files (ASCII format) you wish to analyze, and utilize these functions to expedite cleaning and organization for your project!
Installation
Run the following to install:
pip install fdata
Usage
from fdata_functions import sorter
drug_file = pd.read_csv(‘DRUG20Q1.txt’, delimiter=‘$’)
sorter(drug_file)
…
“Check ‘class_dfs’, ‘missing_dfs’, ‘new_files’, ‘positives’, and ‘inds’ for output”
See function documentation for further explanation
Note: if there are empty lists initialized before the definition, the final output of the function depends upon creating those lists.
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