Segmentation free factor analysis for sub-micron resolution spatial transcriptomics
Project description
FICTURE
FICTURE: Scalable segmentation-free analysis of sub-micron resolution spatial transcriptomics
Preprint (Real data results in the preprint are available on Zenodo)
This repository is under active construction
Currently there are two main branches, the stable branch is a version of FICTURE used in our internal pipeline; the pypi branch is a version that is lagging behind the stable branch but has all core functionalities and is available from pypi. In the near future we will merge these two branches and choose a consistent interface.
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