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Assistance scripts for ONT MinKNOW

Project description

fillet


Table of Contents

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Introduction

fillet is a simulation manager for Oxford Nanopore Technologies MinKNOW software, making adding simulation devices and playback runs easier

Installation

Installing fillet with PyPI

pip install fillet

Install fillet from GitHub

git clone https://github.com/alexomics/fillet
cd fillet
python setup.py install

Usage

fillet installs with a terminal entry point as fillet

Add a bulk FAST5 file for simulation:

fillet sim -t <MinKNOW_config_filename> -b <bulk_file_to simulate>

Remove a bulk FAST5 file for simulation:

fillet sim -t <MinKNOW_config_filename>

Add a simulation device:

fillet add

Remove a simulation device:

fillet add -r

Project details


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Files for fillet, version 0.0.3
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Filename, size fillet-0.0.3-py3-none-any.whl (18.0 kB) File type Wheel Python version py3 Upload date Hashes View hashes
Filename, size fillet-0.0.3.tar.gz (4.4 kB) File type Source Python version None Upload date Hashes View hashes

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