A FISH probe design web interface.
fish-prode Python package has been renamed
ifpd. Check there for newer versions.
FISH Probe Design (FISH-ProDe, pronounced "pro‧de", "brave" or "valiant" in italian) is a Python3 package suite of tools for selection of complementary oligonucleotides to build FISH probes. It also includes a web interface to simplify the selection and remove any need for programming skills.
Read the documentation for more details.
Install from pypi with
sudo -H pip3 install fish-prode, and that's it! That's as easy as it gets.
You can also install from github (any point in history, although we suggest to stick with release tags) as follows:
git clone https://github.com/ggirelli/fish-prode/ cd fish-prode sudo -H pip3 install -e .
More details on how to run FISH-ProDe are available in the documentation.
MIT License Copyright (c) 2017-2018 Gabriele Girelli
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