Analysis package for FlyEye Silhouette data.
FlyEye Analysis is part of the NU FlyEye platform for studying gene expression in Drosophila eye imaginal discs. The analysis package helps users analyze data measured using FlyEye Silhouette.
Given one or more
.silhouette files, FlyEye Analysis facilitates:
Dynamic Measurements. Infer expression dynamics from static data
Data Querying. Select cells by developmental age and cell type
Dynamic Analysis. Analyze and visualize expression dynamics
Spatial Analysis. Detect and quantify spatial expression patterns
Please refer to the documentation page for tips on getting started with analyzing your data.
- Python 3.6+
The simplest method is to install via
pip install flyeye
We've provided a couple tutorial notebooks to help get you started with analyzing your own data. For an example of a complete project utilizing the entire NU FlyEye platform, please refer to our study of Pointed and Yan expression during retinal patterning.
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.