Skip to main content

Python utilities supporting the FOCUS package and cryo-EM data processing in general.

Project description

FOCUSTOOLS offers Python functions and scripts for performing common tasks in cryogenic electron microscopy (cryo-EM) data processing such as postprocessing 3D maps, filtering, masking, computing FSC curves, cropping/padding in real and Fourier space, CTF correction, among others. Some of the scripts and functions contained here were developed to support the FOCUS package. Others were written for the developer’s own studies or mere convenience, and are made available here in the hope they can be useful to someone else.

The I/O of MRC files is based on the [MRCZ library](https://github.com/em-MRCZ/python-mrcz).

Where possible, tasks are accelerated by the [NumExpr](https://github.com/pydata/numexpr) engine.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

focustools-0.2.3.tar.gz (41.2 kB view hashes)

Uploaded source

Built Distribution

focustools-0.2.3-py3-none-any.whl (56.9 kB view hashes)

Uploaded py3

Supported by

AWS AWS Cloud computing Datadog Datadog Monitoring Facebook / Instagram Facebook / Instagram PSF Sponsor Fastly Fastly CDN Google Google Object Storage and Download Analytics Huawei Huawei PSF Sponsor Microsoft Microsoft PSF Sponsor NVIDIA NVIDIA PSF Sponsor Pingdom Pingdom Monitoring Salesforce Salesforce PSF Sponsor Sentry Sentry Error logging StatusPage StatusPage Status page