Skip to main content
Join the official 2019 Python Developers SurveyStart the survey!

Python utilities supporting the FOCUS package and cryo-EM data processing in general.

Project description

FOCUSTOOLS offers Python functions and scripts for performing common tasks in cryogenic electron microscopy (cryo-EM) data processing such as postprocessing 3D maps, filtering, masking, computing FSC curves, cropping/padding in real and Fourier space, CTF correction, among others. Some of the scripts and functions contained here were developed to support the FOCUS package. Others were written for the developer’s own studies or mere convenience, and are made available here in the hope they can be useful to someone else.

The I/O of MRC files is based on the [MRCZ library](https://github.com/em-MRCZ/python-mrcz).

Where possible, tasks are accelerated by the [NumExpr](https://github.com/pydata/numexpr) engine.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for focustools, version 0.2.2
Filename, size File type Python version Upload date Hashes
Filename, size focustools-0.2.2-py3-none-any.whl (56.9 kB) File type Wheel Python version py3 Upload date Hashes View hashes
Filename, size focustools-0.2.2.tar.gz (41.2 kB) File type Source Python version None Upload date Hashes View hashes

Supported by

Elastic Elastic Search Pingdom Pingdom Monitoring Google Google BigQuery Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN SignalFx SignalFx Supporter DigiCert DigiCert EV certificate StatusPage StatusPage Status page