forBIDS - BIDS protocol compliance validation
Project description
forBIDS: a protocol compliance check
forBIDS aims to be a tool for BIDS that forbids deviation from a established acquisition protocol.
It is meant to be ran continuously on session newly converted to BIDS, as a validation before being merged into a dataset.
It aims to check that all planned sequences have been acquired (allowing optional ones), and check that a configured set of sequence parameters match expected values. It is designed for multi-centric/multi-vendor studies: the sequence parameters constraint can be set conditional to Manufacter/Model/Instrument/SoftwareVersion.
design
forbids init <bids_path>: create a.forbidsfolder that contains a BIDS-like structure with json schemas for each series in a BIDS dataset with a set of sessions from each scanner.forbids validate <bids_path> --participant-label <sub> [--session-label <ses>]: validate the subject/session against the schema found in.forbidsby validating all schema files against the subject/session BIDS files and checking for missing or extra/unwanted BIDS files.
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file forbids-0.0.2rc137.post1.tar.gz.
File metadata
- Download URL: forbids-0.0.2rc137.post1.tar.gz
- Upload date:
- Size: 139.3 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: python-requests/2.32.3
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
1b40272b3d97e802a3c9d07c920c79df74c360adcc5c2c4af0df318f0b06ec33
|
|
| MD5 |
c3155163a1b6ef6e032287ffb8a76a4e
|
|
| BLAKE2b-256 |
12e787797865a9e1a2f0556fae84c98e3107cd523cad140f65c13a149d0017c7
|
File details
Details for the file forbids-0.0.2rc137.post1-py3-none-any.whl.
File metadata
- Download URL: forbids-0.0.2rc137.post1-py3-none-any.whl
- Upload date:
- Size: 12.3 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: python-requests/2.32.3
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
22ed0ca76698ac9f7705016a034b97e41099f7979f00b5796e387d9c5398efe6
|
|
| MD5 |
4462247aceddc37dd4645e5b3029b5b9
|
|
| BLAKE2b-256 |
f0886bc8c143977cc82bbcdb417f9a04fd3d913a8bdca92c7b0e43f1634bcd20
|
